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NC_049857.1__YP_009905648.1__H1Z36_gp118__00129
Bact-VirNC_049857.1__YP_009905648.1__H1Z36_gp118__00129
Identity
- Accession:
- NC_049857 ↗
- Kingdom:
- phage
Quality
89.1
mean pLDDT
Taxonomy
TaxID: 2662295
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-66_178-204
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bkfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.63 | 52.0 | 5.43e-01 | 100.0% | 97.6% |
| 1wmhA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.61 | 51.0 | 5.31e-01 | 100.0% | 100.0% |
| 1cnzA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.59 | 44.0 | 3.01e-01 | 81.5% | 75.5% |
| 2c60A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 47.0 | 4.95e-01 | 100.0% | 100.0% |
| 1oeyA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 46.0 | 4.86e-01 | 100.0% | 95.1% |
| 1wjnA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 47.0 | 4.70e-01 | 100.0% | 85.6% |
| 5mz2I00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.57 | 48.0 | 4.20e-01 | 97.8% | 61.2% |
| 5fr6A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 43.0 | 4.54e-01 | 100.0% | 91.6% |
| 5c6dA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 47.0 | 4.56e-01 | 100.0% | 81.3% |
| 3kwlA01 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.55 | 48.0 | 4.79e-01 | 100.0% | 92.8% |
| 2pmvA02 | 2.170.130.30 | Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › | 0.55 | 50.0 | 4.78e-01 | 100.0% | 96.3% |
| 2kkcA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 49.0 | 4.80e-01 | 100.0% | 97.0% |
| 2dymC01 | 3.10.20.620 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 47.0 | 4.59e-01 | 100.0% | 89.1% |
| 1kf6B01 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.52 | 47.0 | 4.52e-01 | 100.0% | 96.2% |
| 3ktnA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 38.0 | 2.60e-01 | 78.3% | 37.6% |
| 1vomA01 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.51 | 44.0 | 2.99e-01 | 94.6% | 26.5% |
| 2hj1A00 | 3.10.20.280 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like | 0.51 | 35.0 | 3.81e-01 | 72.8% | 85.7% |
| 1burS00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.51 | 44.0 | 3.99e-01 | 95.7% | 78.0% |
| 2v3sA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 37.0 | 3.73e-01 | 100.0% | 77.1% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3553026 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.62 | 50.0 | 5.04e-01 | 100.0% | 85.3% |
| 3241250 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 56.0 | 5.37e-01 | 100.0% | 88.6% |
| 3544249 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 52.0 | 4.98e-01 | 100.0% | 80.0% |
| 3719072 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 51.0 | 5.16e-01 | 100.0% | 92.2% |
| 3493732 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 53.0 | 5.25e-01 | 100.0% | 92.6% |
| 3882264 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.60 | 49.0 | 4.59e-01 | 98.9% | 72.7% |
| 3218103 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 54.0 | 5.24e-01 | 100.0% | 89.4% |
| 4015174 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.60 | 48.0 | 4.41e-01 | 100.0% | 66.7% |
| 3211699 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 53.0 | 4.88e-01 | 98.9% | 80.8% |
| 3210219 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 53.0 | 5.05e-01 | 100.0% | 87.3% |
| 3457365 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 52.0 | 4.91e-01 | 100.0% | 81.8% |
| 3528684 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 52.0 | 5.19e-01 | 100.0% | 95.8% |
| 3637520 | 221.1.1.52 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 | 0.58 | 51.0 | 4.89e-01 | 100.0% | 83.8% |
| 3784239 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 52.0 | 4.66e-01 | 100.0% | 85.4% |
| 3184727 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.58 | 45.0 | 4.81e-01 | 98.9% | 97.5% |
| 3710410 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 52.0 | 4.32e-01 | 100.0% | 77.5% |
| 3461367 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 52.0 | 5.15e-01 | 100.0% | 97.9% |
| 3999518 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 51.0 | 4.62e-01 | 100.0% | 78.4% |
| 3421892 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 51.0 | 5.01e-01 | 100.0% | 94.0% |
| 6141 | 221.1.1.52 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 | 0.57 | 47.0 | 4.70e-01 | 100.0% | 85.6% |
| 3889375 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.57 | 47.0 | 4.91e-01 | 100.0% | 97.6% |
| 2157197 | 302.2.1.1 ↗ | a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small | 0.57 | 48.0 | 4.20e-01 | 97.8% | 61.2% |
| 3407676 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.57 | 48.0 | 4.48e-01 | 100.0% | 75.7% |
| 3929879 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.57 | 45.0 | 3.79e-01 | 88.0% | 78.0% |
| 3935379 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 51.0 | 4.50e-01 | 100.0% | 71.1% |
| 3573560 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 49.0 | 4.80e-01 | 100.0% | 89.0% |
| 3495018 | 11.12.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like | 0.56 | 44.0 | 3.42e-01 | 87.0% | 69.1% |
| 3592700 | 221.1.1.52 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 | 0.56 | 51.0 | 4.73e-01 | 100.0% | 86.7% |
| 3398210 | 221.1.1.55 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RAWUL | 0.56 | 49.0 | 4.77e-01 | 100.0% | 92.4% |
| 3935777 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 43.0 | 4.56e-01 | 100.0% | 96.2% |
| 3600944 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 47.0 | 4.36e-01 | 100.0% | 73.9% |
| 3938461 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 47.0 | 4.62e-01 | 100.0% | 89.0% |
| 3231131 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 49.0 | 4.67e-01 | 98.9% | 96.2% |
| 3605278 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 47.0 | 4.01e-01 | 100.0% | 81.9% |
| 3689438 | 221.1.1.52 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 | 0.54 | 48.0 | 4.79e-01 | 100.0% | 94.7% |
| 3358195 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.53 | 46.0 | 4.29e-01 | 100.0% | 76.5% |
| 3248429 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 47.0 | 4.65e-01 | 98.9% | 99.0% |
| 3237024 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 45.0 | 4.18e-01 | 100.0% | 73.3% |
| 3700104 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 45.0 | 4.28e-01 | 100.0% | 93.9% |
| 3800190 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 47.0 | 4.62e-01 | 100.0% | 98.0% |
| 3465326 | 221.1.1.68 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ATG5_UblA | 0.52 | 46.0 | 4.30e-01 | 100.0% | 79.1% |
| 4658615 | 221.1.1.28 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › SOK | 0.51 | 45.0 | 4.50e-01 | 100.0% | 94.7% |
| 3611850 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 45.0 | 4.32e-01 | 100.0% | 96.2% |
| 3776229 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 45.0 | 4.24e-01 | 100.0% | 85.2% |
| 3275391 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 44.0 | 4.21e-01 | 100.0% | 87.3% |
| 3936814 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.51 | 44.0 | 4.25e-01 | 98.9% | 88.6% |
| 4890538 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.51 | 44.0 | 3.53e-01 | 100.0% | 98.5% |
| 3789573 | 7558.1.1.0 ↗ | a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase | 0.50 | 40.0 | 3.24e-01 | 89.1% | 87.2% |
D2
high
residues 87-174
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.77 | 54.0 | 5.48e-01 | 97.7% | 75.3% |
| 3nwgA02 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.65 | 51.0 | 4.88e-01 | 100.0% | 74.3% |
| 5d4nC00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 52.0 | 5.03e-01 | 100.0% | 81.6% |
| 1dfaA03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.61 | 45.0 | 4.41e-01 | 96.6% | 71.6% |
| 4pvkA03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.60 | 46.0 | 3.77e-01 | 100.0% | 41.8% |
| 3fw9A03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.60 | 48.0 | 3.86e-01 | 100.0% | 42.9% |
| 2khdA00 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 43.0 | 4.09e-01 | 90.9% | 63.0% |
| 2ougA00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.60 | 51.0 | 4.38e-01 | 98.9% | 59.6% |
| 2ijrA01 | 3.30.70.1270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Api92-like domains | 0.58 | 45.0 | 4.41e-01 | 100.0% | 76.3% |
| 2rrnA01 | 3.30.70.2040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 46.0 | 4.71e-01 | 100.0% | 91.6% |
| 3pm9A03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 52.0 | 4.68e-01 | 100.0% | 78.5% |
| 2ogaA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 48.0 | 4.27e-01 | 89.8% | 87.2% |
| 3m05B01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 50.0 | 4.98e-01 | 100.0% | 95.7% |
| 3b49A00 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.56 | 48.0 | 3.74e-01 | 97.7% | 52.9% |
| 2hzmG01 | 3.30.310.180 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.56 | 49.0 | 4.57e-01 | 100.0% | 80.0% |
| 4bbyB04 | 3.30.70.3450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 48.0 | 4.62e-01 | 97.7% | 83.7% |
| 6fh1B01 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.56 | 40.0 | 3.02e-01 | 76.1% | 80.3% |
| 5t0oA02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.56 | 49.0 | 4.66e-01 | 97.7% | 86.4% |
| 3uwcA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 45.0 | 4.07e-01 | 90.9% | 87.5% |
| 2i0kA03 | 3.40.462.10 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain | 0.56 | 48.0 | 3.47e-01 | 98.9% | 48.3% |
| 2i14A01 | 3.90.1170.20 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Quinolinate phosphoribosyl transferase, N-terminal domain | 0.55 | 40.0 | 3.76e-01 | 92.0% | 63.2% |
| 3c0tA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.54 | 46.0 | 3.63e-01 | 97.7% | 96.5% |
| 4cyuA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.54 | 47.0 | 4.00e-01 | 100.0% | 61.7% |
| 5ib9A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 46.0 | 3.21e-01 | 94.3% | 86.7% |
| 3bc8A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 45.0 | 3.86e-01 | 92.0% | 79.0% |
| 3hm2A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 36.0 | 2.95e-01 | 70.5% | 46.2% |
| 6n2nA01 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.53 | 46.0 | 3.61e-01 | 94.3% | 78.7% |
| 2zogA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.52 | 45.0 | 3.09e-01 | 94.3% | 52.3% |
| 1k1gA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.52 | 43.0 | 3.87e-01 | 92.0% | 74.6% |
| 4nehA05 | 2.60.40.1530 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 4 | 0.51 | 44.0 | 3.60e-01 | 100.0% | 91.6% |
| 2hc9A02 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.51 | 44.0 | 2.96e-01 | 94.3% | 51.3% |
| 4fvmA02 | 3.30.70.2820 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 45.0 | 4.32e-01 | 100.0% | 89.3% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004549 | 304.5.1.2 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF190 | 0.65 | 58.0 | 5.48e-01 | 100.0% | 86.1% |
| 3285320 | 304.5.1.2 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF190 | 0.63 | 56.0 | 5.23e-01 | 100.0% | 84.5% |
| 3738781 | 304.20.1.2 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › Nrap_D3 | 0.63 | 53.0 | 4.34e-01 | 95.5% | 92.9% |
| 3953979 | 304.5.1.2 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF190 | 0.63 | 56.0 | 5.20e-01 | 100.0% | 86.4% |
| 3320299 | 304.28.1.16 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › AtuA | 0.63 | 55.0 | 5.09e-01 | 100.0% | 93.0% |
| 3527544 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.62 | 55.0 | 4.32e-01 | 100.0% | 58.9% |
| 4563109 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.61 | 46.0 | 4.58e-01 | 97.7% | 77.8% |
| 3172533 | 304.9.1.159 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF29309 | 0.61 | 52.0 | 4.99e-01 | 100.0% | 84.0% |
| 3839279 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.61 | 54.0 | 5.12e-01 | 100.0% | 94.3% |
| 3640281 | 325.1.5.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal protein L10e › Ribosomal_L16 | 0.60 | 52.0 | 4.29e-01 | 100.0% | 61.8% |
| 3944087 | 304.28.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › ACR_tran | 0.59 | 52.0 | 4.89e-01 | 98.9% | 96.4% |
| 4618975 | 304.5.1.2 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF190 | 0.59 | 53.0 | 4.70e-01 | 100.0% | 74.4% |
| 4996208 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.59 | 52.0 | 3.74e-01 | 100.0% | 34.6% |
| 3581969 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 52.0 | 4.51e-01 | 100.0% | 67.1% |
| 3685242 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.58 | 50.0 | 3.96e-01 | 97.7% | 61.6% |
| 4929832 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.57 | 51.0 | 4.86e-01 | 100.0% | 89.4% |
| 3256537 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.57 | 50.0 | 3.64e-01 | 97.7% | 42.1% |
| 3284708 | 241.12.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › YktB/PF0168-like › YktB/PF0168-like › DUF2461 | 0.56 | 46.0 | 3.61e-01 | 93.2% | 50.0% |
| 3658918 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.56 | 47.0 | 4.46e-01 | 92.0% | 81.0% |
| 3298862 | 304.5.1.1 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › P-II | 0.56 | 50.0 | 4.21e-01 | 100.0% | 74.5% |
| 3701502 | 3016.1.1.13 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SepSecS | 0.56 | 46.0 | 3.89e-01 | 92.0% | 92.0% |
| 4927527 | 304.5.1.1 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › P-II | 0.56 | 49.0 | 4.60e-01 | 100.0% | 84.5% |
| 1954877 | 3016.1.1.6 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › DegT_DnrJ_EryC1 | 0.55 | 45.0 | 3.99e-01 | 90.9% | 81.3% |
| 3376635 | 304.113.1.1 ↗ | a+b two layers › Alpha-beta plaits › Alpha subunit of glutamate synthase, insertion domain › Alpha subunit of glutamate synthase, insertion domain › GATase_2 | 0.55 | 48.0 | 4.51e-01 | 96.6% | 91.8% |
| 3236594 | 312.1.1.19 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › PF26216 | 0.55 | 45.0 | 3.64e-01 | 89.8% | 78.8% |
| 3228368 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.54 | 44.0 | 4.25e-01 | 92.0% | 78.1% |
| 3963153 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.53 | 42.0 | 3.47e-01 | 86.4% | 57.0% |
| 3345297 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.53 | 46.0 | 3.66e-01 | 97.7% | 55.8% |
| 4501320 | 304.45.1.1 ↗ | a+b two layers › Alpha-beta plaits › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › HPPK | 0.53 | 47.0 | 3.77e-01 | 100.0% | 59.4% |
| 3601974 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 44.0 | 3.95e-01 | 100.0% | 63.8% |
| 3275591 | 2011.1.1.21 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Gaa1 | 0.53 | 46.0 | 2.96e-01 | 94.3% | 79.7% |
| 4015528 | 3792.1.1.0 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain | 0.52 | 30.0 | 3.05e-01 | 100.0% | 53.3% |
| 3583072 | 304.34.1.0 ↗ | a+b two layers › Alpha-beta plaits › Nucleoside diphosphate kinases › Nucleoside diphosphate kinases | 0.52 | 45.0 | 4.20e-01 | 98.9% | 80.0% |
| 4396118 | 304.60.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10 | 0.51 | 46.0 | 3.78e-01 | 100.0% | 55.6% |
| 3236985 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.51 | 34.0 | 3.47e-01 | 70.5% | 67.8% |
| 3635612 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.51 | 44.0 | 3.31e-01 | 100.0% | 45.1% |
| 3783531 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.51 | 42.0 | 4.18e-01 | 92.0% | 94.4% |
| 4999371 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.51 | 46.0 | 3.83e-01 | 100.0% | 72.0% |
| 4608078 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.51 | 45.0 | 3.00e-01 | 100.0% | 60.6% |
| 3692757 | 2003.1.2.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.50 | 41.0 | 2.69e-01 | 93.2% | 64.2% |
| 5066942 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.50 | 43.0 | 3.00e-01 | 94.3% | 90.0% |