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NC_049900.1__YP_009907762.1__H2675_gp29__00029
Bact-VirNC_049900.1__YP_009907762.1__H2675_gp29__00029
Identity
- Accession:
- NC_049900 ↗
- Kingdom:
- phage
Quality
69.3
mean pLDDT
Taxonomy
TaxID: 2744802
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-76
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ucsA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.78 | 62.0 | 5.22e-01 | 100.0% | 52.5% |
| 3hh0A01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.72 | 58.0 | 5.51e-01 | 100.0% | 73.6% |
| 5d8cA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.72 | 58.0 | 4.58e-01 | 100.0% | 42.1% |
| 3gpvA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.71 | 57.0 | 4.64e-01 | 100.0% | 46.9% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 43.0 | 3.61e-01 | 83.1% | 45.2% |
| 3ez2A01 | 1.10.1660.30 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.58 | 49.0 | 4.71e-01 | 100.0% | 85.7% |
| 4b8vA03 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.57 | 37.0 | 4.02e-01 | 98.3% | 81.6% |
| 2obpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 48.0 | 4.33e-01 | 94.9% | 71.6% |
| 2e1mA05 | 1.10.405.10 | Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › Guanine Nucleotide Dissociation Inhibitor, domain 1 | 0.56 | 39.0 | 3.49e-01 | 100.0% | 48.4% |
| 2djpA00 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.55 | 37.0 | 3.47e-01 | 100.0% | 54.5% |
| 2nraC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 45.0 | 3.46e-01 | 98.3% | 78.0% |
| 3kk4A01 | 1.10.3990.20 | Mainly Alpha › Orthogonal Bundle › Ribbon-helix-helix fold › protein bp1543 | 0.54 | 45.0 | 3.73e-01 | 94.9% | 61.5% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 41.0 | 3.28e-01 | 94.9% | 39.5% |
| 2hgcA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 41.0 | 3.88e-01 | 91.5% | 83.3% |
| 6uvuA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 43.0 | 3.68e-01 | 100.0% | 54.8% |
| 2xzn800 | 3.30.63.20 | Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › | 0.52 | 40.0 | 3.62e-01 | 93.2% | 58.1% |
| 3nqoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 45.0 | 3.25e-01 | 100.0% | 35.6% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929856 | 101.1.9.18 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_2 | 0.75 | 60.0 | 5.23e-01 | 100.0% | 57.8% |
| 5041445 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.75 | 60.0 | 5.28e-01 | 100.0% | 58.9% |
| 5070666 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.75 | 59.0 | 6.12e-01 | 100.0% | 94.5% |
| 5047649 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.73 | 56.0 | 5.98e-01 | 96.6% | 100.0% |
| 4682727 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.73 | 56.0 | 5.79e-01 | 100.0% | 92.7% |
| 3291061 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.72 | 59.0 | 4.78e-01 | 100.0% | 47.0% |
| 2967124 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.72 | 56.0 | 5.41e-01 | 96.6% | 73.9% |
| 3281621 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.72 | 57.0 | 5.93e-01 | 98.3% | 94.5% |
| 3281073 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.71 | 57.0 | 4.82e-01 | 100.0% | 51.4% |
| 5032504 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.71 | 55.0 | 5.67e-01 | 100.0% | 94.5% |
| 3291393 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.71 | 57.0 | 4.67e-01 | 100.0% | 47.0% |
| 4061721 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.71 | 57.0 | 4.44e-01 | 100.0% | 40.8% |
| 3280706 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.71 | 56.0 | 5.11e-01 | 100.0% | 65.0% |
| 3948487 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.70 | 57.0 | 4.36e-01 | 100.0% | 39.3% |
| 5075145 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.70 | 59.0 | 5.76e-01 | 100.0% | 86.2% |
| 3284505 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.69 | 55.0 | 4.47e-01 | 100.0% | 46.1% |
| 3957229 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.67 | 55.0 | 5.57e-01 | 100.0% | 95.0% |
| 4117084 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.62 | 52.0 | 4.49e-01 | 100.0% | 59.0% |
| 3608299 | 108.1.1.28 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 | 0.62 | 47.0 | 4.35e-01 | 100.0% | 63.7% |
| 3506247 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.60 | 50.0 | 3.60e-01 | 100.0% | 37.4% |
| 2559749 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.59 | 50.0 | 4.49e-01 | 100.0% | 96.6% |
| 4968989 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 40.0 | 3.69e-01 | 83.1% | 57.6% |
| 4022706 | 101.1.2.359 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPIID_WHD | 0.55 | 41.0 | 3.79e-01 | 83.1% | 63.7% |
| 5040910 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.53 | 47.0 | 4.25e-01 | 100.0% | 73.8% |
| 3282605 | 101.1.2.508 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25872 | 0.52 | 43.0 | 4.00e-01 | 100.0% | 71.2% |
| 3952617 | 101.1.2.508 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25872 | 0.52 | 43.0 | 3.78e-01 | 100.0% | 62.0% |
| 3962421 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 44.0 | 3.28e-01 | 98.3% | 65.0% |
| 3321732 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 41.0 | 3.62e-01 | 100.0% | 69.0% |