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NC_049946.1__YP_009909435.1__H3V28_gp14__00014
Bact-VirNC_049946.1__YP_009909435.1__H3V28_gp14__00014
Identity
- Accession:
- NC_049946 ↗
- Kingdom:
- phage
Quality
78.2
mean pLDDT
Taxonomy
TaxID: 2847059
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-41
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y9bB01 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.80 | 57.0 | 5.51e-01 | 76.9% | 68.2% |
| 1furB03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.70 | 47.0 | 4.31e-01 | 71.8% | 51.0% |
| 3zxsC02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 44.0 | 3.07e-01 | 100.0% | 90.3% |
| 1e2uA04 | 3.40.50.2030 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 39.0 | 2.62e-01 | 82.1% | 26.6% |
| 4efcA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.52 | 45.0 | 3.94e-01 | 100.0% | 98.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3807164 | 101.1.11.3 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP | 0.76 | 54.0 | 4.84e-01 | 76.9% | 56.4% |
| 4969560 | 101.1.11.38 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF2683 | 0.73 | 52.0 | 4.22e-01 | 76.9% | 41.3% |
| 4674798 | 3430.1.1.1 ↗ | a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD | 0.70 | 46.0 | 3.35e-01 | 71.8% | 23.6% |
| 3970095 | 3430.1.1.0 ↗ | a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain | 0.70 | 46.0 | 3.27e-01 | 71.8% | 22.6% |
| 3964437 | 3430.1.1.1 ↗ | a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD | 0.69 | 46.0 | 3.39e-01 | 74.4% | 24.5% |
| 3280235 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.68 | 46.0 | 3.73e-01 | 71.8% | 46.7% |
| 4980639 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.65 | 46.0 | 4.40e-01 | 79.5% | 64.4% |
| 1391387 | 4953.1.1.1 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C | 0.52 | 42.0 | 3.54e-01 | 100.0% | 71.8% |
D2
medium
residues 46-76
Domain cluster:
representative