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NC_049948.1__YP_009909599.1__H3V30_gp35__00035

Bact-Vir

NC_049948.1__YP_009909599.1__H3V30_gp35__00035

Identity

Accession:
NC_049948 ↗
Kingdom:
phage

Quality

83.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Jouyvirus› Escherichia_phage_ev017

TaxID: 2847060

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 144-194
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2nr4A02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.83 56.0 5.42e-01 76.5% 62.1%
5ux2B01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.76 65.0 4.20e-01 94.1% 57.5%
1tj7A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.71 60.0 4.78e-01 96.1% 66.7%
4u1cA01 4.10.860.10 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain 0.68 46.0 4.57e-01 74.5% 69.2%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 56.0 4.78e-01 94.1% 64.7%
1lkoA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.65 52.0 3.91e-01 96.1% 82.8%
3hx3A01 1.10.8.20 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p 0.63 53.0 4.87e-01 96.1% 94.0%
1vq8P03 1.10.1200.60 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › 0.61 51.0 5.06e-01 94.1% 94.5%
2mqaA00 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.56 45.0 3.51e-01 94.1% 48.8%
2f76X00 1.10.150.490 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Retroviral GAG p10 protein 0.54 44.0 3.62e-01 94.1% 52.0%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4291782 4952.1.1.0 ↗ alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.76 66.0 5.08e-01 96.1% 63.6%
3365581 4952.1.1.1 ↗ alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › Lyase_1 0.75 63.0 4.83e-01 94.1% 60.0%
4114241 4952.1.1.0 ↗ alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.74 65.0 5.19e-01 98.0% 72.0%
4290275 4952.1.1.1 ↗ alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › Lyase_1 0.74 65.0 5.01e-01 98.0% 64.5%
4947230 4952.1.1.1 ↗ alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › Lyase_1 0.73 64.0 5.03e-01 98.0% 66.7%
4933446 4952.1.1.0 ↗ alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.73 64.0 5.09e-01 98.0% 68.0%
4561725 4952.1.1.0 ↗ alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.73 63.0 4.99e-01 98.0% 67.6%
4457905 4952.1.1.0 ↗ alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.72 60.0 4.88e-01 96.1% 69.0%
5007379 4952.1.1.0 ↗ alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.72 62.0 4.98e-01 98.0% 67.0%
3512663 102.1.1.30 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8 0.61 52.0 4.40e-01 98.0% 67.8%
3835056 1128.1.1.0 ↗ alpha bundles › LYR protein › LYR protein › LYR protein 0.59 48.0 3.83e-01 98.0% 71.2%
4947168 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.56 44.0 3.84e-01 94.1% 71.1%
4927077 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.56 46.0 3.17e-01 100.0% 49.5%