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NC_049961.1__YP_009910180.1__H3010_gp01__00001

Bact-Vir

NC_049961.1__YP_009910180.1__H3010_gp01__00001

Identity

Accession:
NC_049961 ↗
Kingdom:
phage

Quality

92.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salasmaviridae› Harambevirus› Bacillus_phage_BeachBum

TaxID: 1983461

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-103
PDB
Domain cluster: rep: MZ570263.1__UTC25169.1__Bfsp1_13__00013__D4-79
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4il7A00 2.60.120.1300 Mainly Beta › Sandwich › Jelly Rolls › 0.57 30.0 3.23e-01 97.0% 57.6%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.57 41.0 4.64e-01 85.0% 98.7%
2hfqA00 3.10.510.10 Alpha Beta › Roll › NE1680-like fold › NE1680-like 0.57 41.0 4.42e-01 94.0% 89.4%
1m0wA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.57 33.0 3.22e-01 70.0% 52.8%
2qcsB02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 30.0 2.79e-01 94.0% 44.8%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1442393 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.61 44.0 4.35e-01 77.0% 75.2%
2106285 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.60 45.0 4.38e-01 77.0% 75.9%
2527501 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.60 44.0 4.40e-01 77.0% 78.8%
3345090 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.60 44.0 4.32e-01 77.0% 75.0%
3271707 11.1.1.60 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Vps26 0.54 39.0 3.28e-01 74.0% 49.7%
2530507 220.3.1.3 ↗ beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Glycoprot_B_PH1 0.54 48.0 3.74e-01 100.0% 77.6%
1921553 1119.1.1.1 ↗ a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW 0.52 39.0 2.95e-01 80.0% 99.2%
3737793 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.51 36.0 2.97e-01 74.0% 61.7%
None — 0.51 37.0 3.02e-01 78.0% 57.5%
3306922 11.1.1.60 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Vps26 0.51 38.0 3.19e-01 79.0% 50.6%
4109626 1119.1.1.1 ↗ a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW 0.50 38.0 2.89e-01 82.0% 99.6%