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NC_051582.1__YP_009949576.1__I5G59_gp12__00012

Bact-Vir

Identity

Accession:: NC_051582 ↗
Kingdom:: phage

Quality

75.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lilmcdreamyvirus› Mycobacterium_phage_LilMcDreamy

TaxID: 2652422

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-70

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF23826.2 best	DUF7196	65.0	8.10e-18	100.0%	72.1%

CATH (14)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
7kw8A02	3.20.170.30	Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold ›	0.61	50.0	4.49e-01	98.1%	75.0%
1unnC00	3.30.1490.100	Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain	0.59	47.0	3.79e-01	92.5%	50.5%
1yukB01	2.60.40.1510	Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3	0.58	40.0	3.55e-01	84.9%	48.7%
3kalB05	3.30.1490.50	Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Glutathione synthase lid domain	0.56	40.0	3.92e-01	96.2%	71.2%
3lwaA01	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.55	46.0	3.39e-01	98.1%	63.0%
1xa3A02	3.30.1540.10	Alpha Beta › 2-Layer Sandwich › formyl-coa transferase, domain 3 › formyl-coa transferase, domain 3	0.54	39.0	3.23e-01	79.2%	80.6%
1dpeA02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.54	36.0	2.87e-01	71.7%	91.6%
2hjqA01	3.40.5.20	Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › YqbF domain	0.54	38.0	4.04e-01	77.4%	100.0%
3nyiB01	3.40.50.10170	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.53	38.0	2.91e-01	83.0%	83.4%
3ooxA00	2.60.120.330	Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain	0.53	41.0	2.64e-01	90.6%	88.9%
2levA00	4.10.430.10	Few Secondary Structures › Irregular › H-NS DNA Binding Protein › Histone-like protein H-NS, C-terminal domain	0.53	38.0	3.76e-01	96.2%	75.4%
4r2fA02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.52	39.0	2.82e-01	90.6%	78.4%
1sazA01	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.51	36.0	2.64e-01	77.4%	77.8%
3vi3B02	2.60.40.1510	Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3	0.51	39.0	2.87e-01	84.9%	44.4%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5026064	304.1.1.1 ↗	a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C	0.73	52.0	4.08e-01	75.5%	100.0%
3862518	4076.1.1.2 ↗	a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Cauli_VI	0.63	50.0	5.04e-01	88.7%	85.5%
3553167	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.59	39.0	2.87e-01	84.9%	24.0%
5047600	223.1.1.0 ↗	a+b three layers › Profilin-like › sensor domains › sensor domains	0.58	42.0	3.24e-01	81.1%	57.8%
3465504	4076.1.1.0 ↗	a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like	0.55	42.0	4.30e-01	96.2%	96.0%
4946413	2010.1.1.1 ↗	a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV	0.54	45.0	3.38e-01	100.0%	65.2%
3942988	4187.2.1.1 ↗	a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA	0.50	36.0	3.48e-01	83.0%	69.2%