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NC_051598.1__YP_009951121.1__I5G77_gp35__00035

Bact-Vir

Identity

Accession:: NC_051598 ↗
Kingdom:: phage

Quality

92.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Timquatrovirus› Mycobacterium_phage_Findley

TaxID: 2015882

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-72

PDB

Domain cluster: rep: MN234178.1__QFG09584.1__PBI_TRIPLEJ_40__00040__D9-77

CATH (31)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3kxaA02	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.80	67.0	6.88e-01	100.0%	95.5%
2r1jL00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.80	66.0	6.75e-01	92.9%	93.9%
2ofyA01	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.80	63.0	6.38e-01	92.9%	85.7%
3u3wA01	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.79	66.0	6.66e-01	98.6%	92.8%
1y7yA00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.78	62.0	6.29e-01	92.9%	87.0%
3pxpA01	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.78	70.0	6.35e-01	100.0%	82.8%
3qf3D00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.77	65.0	5.28e-01	92.9%	57.8%
3zhiA00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.77	65.0	6.43e-01	92.9%	95.9%
2kpjA01	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.76	60.0	6.05e-01	92.9%	87.1%
2wusS00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.76	67.0	6.41e-01	100.0%	87.8%
6rnzA00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.74	61.0	6.31e-01	97.1%	97.0%
4jcyA00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.73	62.0	5.69e-01	97.1%	71.7%
1y9qA01	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.72	65.0	6.09e-01	100.0%	87.1%
2awiA01	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.70	57.0	5.88e-01	98.6%	95.5%
3f51C00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.70	60.0	5.56e-01	98.6%	74.4%
2da7A00	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.70	45.0	4.48e-01	94.3%	63.4%
1b72A00	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.70	46.0	4.70e-01	97.1%	69.1%
1uhsA01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.70	43.0	4.87e-01	97.1%	81.5%
2da3A01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.70	44.0	5.24e-01	95.7%	95.7%
2ys9A00	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.70	43.0	4.39e-01	91.4%	62.9%
1lliA00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.70	57.0	5.27e-01	94.3%	70.8%
2ewtA00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.70	56.0	5.65e-01	97.1%	88.7%
3fyaB00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.69	60.0	5.86e-01	97.1%	87.0%
1x2nA01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.68	46.0	4.93e-01	95.7%	81.7%
1x2mA01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.68	42.0	4.69e-01	95.7%	81.5%
8dtqA01	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.66	54.0	5.16e-01	97.1%	79.3%
4pswA03	1.10.10.390	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.62	40.0	4.40e-01	100.0%	87.0%
2ef8A00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.61	51.0	4.91e-01	97.1%	85.7%
1c9bA02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.60	52.0	4.55e-01	97.1%	79.2%
1g3nC01	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.55	46.0	3.90e-01	94.3%	75.0%
2om6A02	1.10.150.400	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 ›	0.54	48.0	4.62e-01	100.0%	86.1%

ECOD (21)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3947329	101.1.4.3 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3	0.80	66.0	6.83e-01	95.7%	96.9%
381796	101.1.4.3 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3	0.80	67.0	5.35e-01	100.0%	48.1%
3978391	101.1.4.0 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like	0.79	64.0	6.46e-01	92.9%	87.1%
3957550	101.1.4.3 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3	0.79	62.0	6.30e-01	92.9%	85.7%
5083592	101.1.4.18 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31	0.77	63.0	6.52e-01	100.0%	95.4%
3944622	101.1.4.0 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like	0.77	67.0	6.43e-01	100.0%	85.0%
4034164	101.1.4.3 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3	0.76	65.0	5.30e-01	92.9%	56.0%
5030212	101.1.4.3 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3	0.76	63.0	6.34e-01	95.7%	91.4%
1867991	101.1.4.3 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3	0.74	63.0	6.07e-01	94.3%	88.7%
5051582	101.1.4.0 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like	0.74	61.0	6.34e-01	92.9%	98.5%
2773	101.1.4.3 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3	0.74	60.0	5.89e-01	92.9%	81.8%
3587619	101.1.4.0 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like	0.73	60.0	6.01e-01	92.9%	91.4%
4034109	101.1.4.0 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like	0.73	55.0	5.71e-01	81.4%	86.2%
2577290	101.1.4.3 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3	0.72	62.0	5.93e-01	97.1%	82.7%
4860587	101.1.1.9 ↗	alpha arrays › HTH › HTH › Three-helical HTH › HTH_3	0.72	62.0	5.99e-01	97.1%	85.9%
3285107	101.1.4.0 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like	0.70	61.0	5.70e-01	100.0%	78.9%
3588180	101.1.4.0 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like	0.65	55.0	5.09e-01	100.0%	72.6%
3507798	101.1.1.1 ↗	alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain	0.65	52.0	5.45e-01	100.0%	95.4%
3581101	101.1.10.1 ↗	alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N	0.61	49.0	3.82e-01	92.9%	56.5%
3204144	101.1.10.3 ↗	alpha arrays › HTH › HTH › Cyclin-like › TFIIB	0.59	48.0	4.00e-01	92.9%	68.5%
3172088	101.1.10.1 ↗	alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N	0.56	48.0	3.78e-01	97.1%	69.0%

D2 medium residues 81-110

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4jixB00	3.30.2010.10	Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain"	0.75	59.0	4.17e-01	100.0%	27.9%
1uelB00	6.10.300.40	Special › Helix non-globular › cAMP-dependent Protein Kinase, Chain A ›	0.67	50.0	4.41e-01	86.7%	52.1%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4111139	2011.1.1.7 ↗	a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M18	0.81	58.0	3.29e-01	80.0%	7.3%