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NC_051624.1__YP_009953628.1__I5H03_gp067__00039

Bact-Vir

NC_051624.1__YP_009953628.1__I5H03_gp067__00039

Identity

Accession:
NC_051624 ↗
Kingdom:
phage

Quality

91.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-114
PDB
Domain cluster: representative
CATH (69)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2b0hA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.84 54.0 5.02e-01 98.1% 53.9%
3dyjA02 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.84 52.0 4.54e-01 98.1% 43.7%
3u0cA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.82 57.0 4.98e-01 100.0% 49.7%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.80 52.0 5.78e-01 100.0% 81.4%
2ap3A00 1.20.120.570 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YkyA-like 0.79 58.0 4.66e-01 100.0% 42.2%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.78 61.0 6.16e-01 98.1% 82.1%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.77 60.0 6.07e-01 98.1% 82.5%
3ajwA00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.76 61.0 5.63e-01 100.0% 67.2%
1i4dA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.76 59.0 4.81e-01 100.0% 46.3%
3smtA02 3.90.1420.10 Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 2 › Rubisco LSMT, substrate-binding domain 0.75 51.0 4.41e-01 90.6% 45.1%
1nafA02 1.20.58.160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 39.0 4.31e-01 100.0% 62.4%
1sumB01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.75 50.0 5.03e-01 100.0% 67.3%
4dylA02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.74 63.0 6.64e-01 100.0% 100.0%
2efkA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.74 65.0 4.69e-01 100.0% 37.0%
1t72A01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.74 51.0 4.98e-01 100.0% 65.0%
1dn1B00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 67.0 5.21e-01 100.0% 50.0%
1kmiZ02 1.10.287.500 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.73 57.0 5.23e-01 100.0% 64.9%
1i6zA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.72 51.0 4.73e-01 95.3% 57.8%
2nnwA02 1.10.287.4070 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.71 60.0 5.67e-01 91.5% 100.0%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.70 48.0 5.54e-01 88.7% 100.0%
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.70 57.0 6.07e-01 100.0% 97.9%
3uumA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 54.0 5.19e-01 98.1% 71.3%
3qweA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.69 58.0 4.32e-01 100.0% 36.5%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.69 55.0 5.41e-01 99.1% 78.6%
1o5hA00 1.20.120.680 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle 0.69 51.0 4.13e-01 100.0% 41.0%
8a1gC01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.69 53.0 4.45e-01 100.0% 48.1%
1fewA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 65.0 5.38e-01 100.0% 61.8%
2q7rB00 1.20.120.550 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain 0.69 47.0 4.25e-01 97.2% 51.0%
2ot4A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.69 47.0 4.71e-01 92.5% 69.2%
7aalA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.68 65.0 4.67e-01 100.0% 41.0%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.68 53.0 5.73e-01 99.1% 97.8%
4fzsA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.68 63.0 4.91e-01 100.0% 50.2%
1qdbA02 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.67 46.0 4.15e-01 90.6% 51.7%
1oahA02 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.67 47.0 4.31e-01 96.2% 54.2%
3nvoB02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.65 46.0 4.49e-01 87.7% 66.4%
4gyvE00 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.65 58.0 4.63e-01 99.1% 81.4%
4d0nB01 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.65 56.0 4.29e-01 95.3% 73.9%
3mpxA01 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.64 58.0 4.68e-01 100.0% 81.1%
1u8vB03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.64 56.0 4.58e-01 100.0% 91.5%
1yf2A02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.64 59.0 5.93e-01 98.1% 97.2%
4mh6A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 59.0 5.13e-01 100.0% 69.2%
3ousA00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 47.0 5.23e-01 79.2% 100.0%
2qe7G01 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.63 51.0 5.32e-01 100.0% 95.9%
7zxkC01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.63 46.0 4.13e-01 76.4% 76.7%
4h3tA02 1.10.132.100 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.62 39.0 3.55e-01 85.8% 46.8%
6j8eA01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.62 49.0 4.95e-01 85.8% 100.0%
2oexA02 1.20.140.50 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › alix/aip1 like domains 0.62 55.0 4.52e-01 100.0% 55.8%
1aepA00 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.61 48.0 4.25e-01 83.0% 80.4%
1uruA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.61 56.0 4.43e-01 99.1% 71.3%
4wpeA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.61 57.0 4.12e-01 100.0% 43.6%
2yyiA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.61 53.0 4.35e-01 100.0% 88.6%
1qu7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.61 56.0 4.29e-01 100.0% 46.7%
3pltA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.60 53.0 4.22e-01 100.0% 47.7%
6q45G01 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.60 54.0 4.88e-01 100.0% 84.2%
1x04A00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.60 54.0 4.40e-01 100.0% 56.0%
8ek4A01 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.60 46.0 4.28e-01 99.1% 64.7%
3ofnY00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.60 52.0 5.13e-01 98.1% 88.7%
2q12A00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.60 54.0 4.13e-01 100.0% 44.6%
6iknD01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.59 55.0 4.01e-01 100.0% 41.2%
3mk7A00 1.20.210.10 Mainly Alpha › Up-down Bundle › Cytochrome C Oxidase; Chain A › Cytochrome c oxidase-like, subunit I domain 0.58 51.0 3.35e-01 97.2% 98.3%
2pg0A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.57 52.0 4.64e-01 100.0% 96.6%
1yo7A00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.57 51.0 4.93e-01 96.2% 100.0%
3a7mA01 1.20.58.380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. 0.57 39.0 3.92e-01 80.2% 68.2%
4nqiD00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.56 51.0 3.95e-01 99.1% 45.7%
1t98A02 1.20.58.590 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain 0.56 47.0 4.14e-01 100.0% 60.7%
7lb8B01 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.56 51.0 3.61e-01 100.0% 78.9%
1nu7D01 1.20.120.750 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Staphylcoagulase, helix bundle domain 1 0.55 41.0 3.79e-01 100.0% 60.7%
1k74D00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.54 47.0 3.51e-01 97.2% 68.4%
2ib0A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.54 49.0 4.51e-01 99.1% 81.5%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3571743 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.88 50.0 4.54e-01 95.3% 44.4%
1019364 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.75 50.0 4.96e-01 100.0% 64.9%
3254975 603.2.1.2 alpha bundles › STAT-like › STAT › STAT › Dict-STAT-coil 0.75 49.0 4.82e-01 95.3% 61.7%
3973441 606.1.1.0 alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.74 59.0 6.32e-01 84.9% 100.0%
3795757 603.1.1.97 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE 0.73 67.0 4.95e-01 100.0% 41.5%
3519973 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.73 64.0 4.73e-01 100.0% 39.6%
1291200 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.73 64.0 4.49e-01 100.0% 33.4%
3388439 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.73 53.0 3.94e-01 100.0% 30.8%
3539926 603.1.1.97 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE 0.73 66.0 5.15e-01 100.0% 48.4%
3579748 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.73 56.0 4.75e-01 99.1% 50.6%
3577907 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.73 63.0 4.64e-01 100.0% 38.0%
3929613 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.72 57.0 4.08e-01 100.0% 29.2%
3711643 3939.1.1.0 alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.72 56.0 4.12e-01 99.1% 32.5%
3955770 606.1.1.0 alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.72 66.0 6.18e-01 99.1% 95.4%
3551506 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.72 63.0 4.40e-01 100.0% 32.3%
3477880 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.72 57.0 4.11e-01 100.0% 30.7%
4187493 603.1.1.103 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 0.71 48.0 4.35e-01 92.5% 50.3%
1019380 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.71 47.0 4.76e-01 95.3% 66.7%
4933289 606.1.1.1 alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop 0.71 62.0 5.77e-01 94.3% 100.0%
5011612 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.71 46.0 4.33e-01 96.2% 53.8%
3952630 3755.1.1.0 alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related 0.71 65.0 5.86e-01 100.0% 73.6%
4942757 606.1.1.1 alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop 0.70 60.0 6.12e-01 93.4% 100.0%
4520789 1204.1.1.0 alpha bundles › Bacteriocin pyocin-S2 N-terminal domain › Bacteriocin pyocin-S2 N-terminal domain › Bacteriocin pyocin-S2 N-terminal domain 0.70 65.0 5.05e-01 99.1% 50.5%
3640196 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.70 66.0 4.81e-01 100.0% 40.8%
3737139 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.70 65.0 4.64e-01 100.0% 36.8%
3473142 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.69 53.0 4.83e-01 99.1% 61.4%
5002845 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.69 62.0 6.00e-01 100.0% 86.7%
3594084 604.5.1.0 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.69 51.0 4.59e-01 97.2% 56.6%
4980516 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.69 59.0 5.88e-01 91.5% 93.6%
4320014 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.68 64.0 4.58e-01 100.0% 38.5%
3206519 632.22.1.62 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › ATG17_like 0.68 55.0 4.49e-01 100.0% 47.2%
1734350 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.68 55.0 3.95e-01 99.1% 30.9%
3309050 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.68 60.0 5.20e-01 100.0% 68.8%
4016292 192.2.1.18 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING 0.68 56.0 5.12e-01 100.0% 68.9%
4446432 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.68 63.0 4.74e-01 100.0% 72.1%
3602716 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.67 47.0 4.45e-01 91.5% 60.8%
3691415 2004.1.1.748 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15, AAA_23, SbcC_Walker_B 0.67 63.0 3.88e-01 100.0% 19.6%
3735874 109.4.1.356 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.67 44.0 2.87e-01 91.5% 15.7%
4203130 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.67 59.0 5.77e-01 94.3% 90.4%
4995732 604.32.1.0 alpha bundles › Spectrin repeat-like › Recombination protein uvsY › Recombination protein uvsY 0.66 61.0 5.49e-01 98.1% 73.6%
3808040 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.66 62.0 5.08e-01 100.0% 77.6%
3378097 604.1.1.110 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › WIT1_2_N 0.66 48.0 4.62e-01 93.4% 66.7%
4297121 3755.3.1.46 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › She9_MDM33 0.66 62.0 4.77e-01 100.0% 52.3%
3598164 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.66 62.0 5.81e-01 100.0% 87.2%
5007124 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.66 57.0 4.10e-01 100.0% 34.1%
4267909 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.66 61.0 4.87e-01 98.1% 55.9%
3565766 603.1.1.103 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 0.66 45.0 3.99e-01 100.0% 47.5%
3977409 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.66 61.0 5.56e-01 100.0% 83.7%
5052608 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.65 61.0 4.98e-01 100.0% 70.8%
3754833 4177.1.1.38 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Tektin 0.65 61.0 4.82e-01 99.1% 57.5%
3409567 3755.3.1.324 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF725 0.65 49.0 4.20e-01 100.0% 50.3%
4392204 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.65 60.0 4.68e-01 100.0% 95.9%
5044205 3755.3.1.637 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.65 60.0 4.28e-01 100.0% 36.9%
3911275 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.65 61.0 3.97e-01 100.0% 31.2%
3404343 192.29.1.1 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom 0.65 52.0 5.57e-01 96.2% 100.0%
5084060 3755.3.1.637 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.65 60.0 5.24e-01 100.0% 96.1%
3576467 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.65 60.0 4.23e-01 100.0% 36.7%
4627992 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.64 59.0 4.16e-01 100.0% 95.6%
3251434 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.64 60.0 4.93e-01 100.0% 60.0%
4520297 3939.1.1.0 alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.64 59.0 4.45e-01 100.0% 55.9%
3908810 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.64 59.0 4.21e-01 100.0% 38.0%
3430042 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 42.0 3.00e-01 100.0% 23.3%
3213527 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.64 59.0 4.25e-01 100.0% 39.3%
4955963 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.64 59.0 4.71e-01 100.0% 55.0%
4175809 5086.1.1.88 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_CyaD 0.64 57.0 4.87e-01 96.2% 100.0%
4936312 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.64 43.0 4.31e-01 87.7% 67.3%
3642673 3922.1.1.7 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Auxin_canalis 0.64 55.0 4.68e-01 92.5% 90.9%
4116939 2004.1.1.525 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23, AAA_27, SbcC_Walker_B 0.64 56.0 3.66e-01 100.0% 32.1%
3809724 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.62 46.0 4.22e-01 100.0% 58.6%
3272245 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.62 49.0 3.68e-01 95.3% 33.3%
5060002 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.62 56.0 4.73e-01 100.0% 60.0%
5036055 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.61 56.0 3.88e-01 99.1% 34.7%
5007101 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.61 56.0 3.79e-01 99.1% 30.6%
4887185 4970.1.1.0 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.61 53.0 5.38e-01 93.4% 97.2%
3675873 3291.1.1.1 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 0.61 56.0 4.61e-01 100.0% 64.9%
3872501 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.61 55.0 3.69e-01 99.1% 27.8%
3289782 5067.1.1.4 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL 0.60 54.0 3.32e-01 100.0% 17.3%
3470751 3755.3.1.297 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF9 0.60 54.0 4.73e-01 100.0% 68.1%
3804939 192.2.1.3 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Rad50_zn_hook 0.60 54.0 4.93e-01 100.0% 98.6%
3430178 601.1.2.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.59 44.0 3.66e-01 96.2% 46.3%
3740053 4177.1.1.27 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_4 0.59 54.0 3.96e-01 99.1% 40.0%
3321594 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 29.0 2.61e-01 88.7% 32.7%
3968997 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.58 53.0 4.93e-01 100.0% 100.0%
3737311 192.2.1.17 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Sin3_corepress 0.58 52.0 4.87e-01 99.1% 89.2%
3694752 3755.3.1.121 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Sin3_corepress 0.57 50.0 4.81e-01 96.2% 100.0%
4218603 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.57 45.0 4.09e-01 100.0% 62.0%
3743346 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 47.0 3.27e-01 97.2% 50.4%
3907440 603.1.1.103 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 0.51 46.0 3.89e-01 100.0% 61.1%
D2 medium residues 178-233
PDB
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.61 39.0 4.08e-01 78.6% 71.2%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 39.0 4.19e-01 71.4% 80.9%
2gumB01 2.30.30.1230 Mainly Beta › Roll › SH3 type barrels. › 0.59 40.0 3.39e-01 71.4% 56.0%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 43.0 3.81e-01 78.6% 58.0%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 38.0 3.85e-01 73.2% 67.9%
1cruA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.56 41.0 2.48e-01 80.4% 27.5%
1u0lA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 38.0 3.74e-01 73.2% 84.4%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 38.0 3.92e-01 78.6% 78.4%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 36.0 3.35e-01 73.2% 49.3%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 36.0 3.09e-01 73.2% 38.0%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 37.0 3.62e-01 83.9% 61.5%
1hczA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.55 39.0 3.86e-01 76.8% 86.4%
6l4qB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 44.0 3.46e-01 94.6% 68.1%
4up7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 43.0 3.30e-01 92.9% 63.2%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 36.0 3.70e-01 78.6% 75.0%
2akkA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 38.0 3.56e-01 78.6% 60.8%
1vw5A00 3.30.70.1420 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Structure from the mobile metagenome of cole harbour salt marsh: integron cassette protein hfx_cass1 0.53 37.0 2.83e-01 75.0% 39.7%
2qc5A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 38.0 2.51e-01 82.1% 15.4%
2rsmA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 41.0 3.45e-01 94.6% 66.1%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.53 38.0 2.88e-01 80.4% 75.8%
6xofA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 40.0 2.71e-01 89.3% 81.0%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 35.0 3.44e-01 71.4% 84.4%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 36.0 3.26e-01 76.8% 53.5%
3go5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 41.0 3.86e-01 91.1% 80.0%
2atcB02 2.30.30.20 Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain 0.51 34.0 3.54e-01 78.6% 76.9%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 38.0 2.48e-01 87.5% 16.1%
8djfA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.50 36.0 2.44e-01 82.1% 20.5%
1v58A01 3.10.450.70 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Disulphide bond isomerase, DsbC/G, N-terminal 0.50 35.0 3.27e-01 73.2% 63.4%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3620094 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 40.0 4.07e-01 78.6% 65.5%
3617355 4.1.1.348 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor, SMN_YG-box 0.62 41.0 3.52e-01 73.2% 41.1%
4179160 2.1.1.24 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE 0.61 48.0 3.79e-01 89.3% 59.2%
3353469 5.3.1.2 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › B_lectin 0.61 41.0 3.44e-01 71.4% 96.2%
4093810 2.1.1.24 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE 0.60 48.0 3.97e-01 92.9% 68.2%
3931993 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 39.0 3.85e-01 78.6% 63.3%
3627842 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 39.0 3.39e-01 78.6% 42.2%
4890270 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.59 38.0 3.89e-01 78.6% 68.5%
3408588 4.1.1.243 beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.57 38.0 3.62e-01 71.4% 97.1%
3898672 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 39.0 3.81e-01 76.8% 69.2%
4144799 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.55 42.0 3.97e-01 85.7% 90.0%
2717779 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.55 40.0 3.56e-01 78.6% 56.1%
3319245 5.1.2.56 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › TEN_NHL 0.55 41.0 2.88e-01 85.7% 25.7%
3766868 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.54 39.0 3.41e-01 78.6% 53.3%
4429356 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.54 42.0 4.06e-01 87.5% 86.2%
3419955 5.1.3.207 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40, NBCH_WD40 0.53 38.0 2.40e-01 78.6% 12.6%
3358791 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.53 40.0 2.82e-01 85.7% 25.7%
3918564 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.53 38.0 3.51e-01 78.6% 68.0%
3780929 5.1.3.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b 0.52 39.0 2.58e-01 82.1% 17.7%
3514010 5.1.4.218 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT80_2nd 0.52 38.0 2.51e-01 80.4% 19.3%
4091771 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 36.0 3.56e-01 82.1% 70.0%
3973911 2.1.1.346 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF4824 0.51 39.0 3.51e-01 91.1% 82.2%
5058926 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.50 39.0 3.68e-01 92.9% 82.7%
3765561 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.50 35.0 2.44e-01 78.6% 22.1%
None 0.50 37.0 2.47e-01 83.9% 22.2%