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NC_051641.1__YP_009955392.1__I5H21_gp085__00085
Bact-VirNC_051641.1__YP_009955392.1__I5H21_gp085__00085
Identity
- Accession:
- NC_051641 ↗
- Kingdom:
- phage
Quality
88.4
mean pLDDT
Taxonomy
TaxID: 2182394
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 31-107
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r7rA03 | 1.10.10.1990 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Viral RNA-directed RNA polymerase, 4-helical domain | 0.68 | 41.0 | 4.13e-01 | 81.8% | 59.2% |
| 1vt0M05 | 6.10.280.90 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 37.0 | 3.77e-01 | 80.5% | 54.1% |
| 4hteA03 | 1.10.167.30 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › | 0.64 | 45.0 | 4.49e-01 | 83.1% | 71.2% |
| 3n2oA03 | 1.20.58.930 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 49.0 | 4.53e-01 | 92.2% | 67.7% |
| 3ut4A00 | 1.25.40.750 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Domain of unknown function DUF5071 | 0.61 | 39.0 | 3.32e-01 | 80.5% | 39.1% |
| 2dk1A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.60 | 28.0 | 3.31e-01 | 84.4% | 62.0% |
| 1uouA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.59 | 35.0 | 3.75e-01 | 77.9% | 67.6% |
| 2zo4A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 30.0 | 3.72e-01 | 72.7% | 81.6% |
| 2aw6A02 | 1.25.40.400 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 45.0 | 3.20e-01 | 87.0% | 38.0% |
| 3bvoA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.55 | 45.0 | 4.38e-01 | 93.5% | 82.6% |
| 3ke2B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 34.0 | 3.19e-01 | 81.8% | 52.1% |
| 3qp1A00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.52 | 43.0 | 3.29e-01 | 90.9% | 91.0% |
| 2wpvE00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 40.0 | 2.78e-01 | 87.0% | 29.6% |
| 6e5bN00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.50 | 36.0 | 2.81e-01 | 79.2% | 71.9% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3993797 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 54.0 | 4.66e-01 | 88.3% | 72.2% |
| 3894911 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.65 | 52.0 | 4.53e-01 | 84.4% | 77.3% |
| 3779493 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 51.0 | 3.00e-01 | 94.8% | 40.7% |
| 5033504 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.60 | 42.0 | 2.93e-01 | 74.0% | 96.8% |
| 3609558 | 109.4.1.17 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin | 0.58 | 37.0 | 3.39e-01 | 83.1% | 45.5% |
| 3291252 | 4107.1.1.1 ↗ | alpha arrays › Jann2411-like › Jann2411-like › Jann2411-like › ABATE,zf-CGNR | 0.58 | 49.0 | 3.86e-01 | 96.1% | 52.6% |
| 5045683 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.58 | 42.0 | 2.88e-01 | 76.6% | 97.5% |
| 3997337 | 2.1.1.68 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI1_C | 0.58 | 39.0 | 3.83e-01 | 70.1% | 70.6% |
| 3268092 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 41.0 | 3.61e-01 | 77.9% | 89.2% |
| 3719754 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 43.0 | 3.12e-01 | 81.8% | 68.6% |
| 3699171 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 47.0 | 3.10e-01 | 98.7% | 68.4% |
| 5083595 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.55 | 36.0 | 2.44e-01 | 93.5% | 17.3% |
| 5028212 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.53 | 43.0 | 3.47e-01 | 87.0% | 95.3% |
| 3844118 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 43.0 | 3.06e-01 | 88.3% | 37.0% |
| 3443063 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.51 | 41.0 | 3.16e-01 | 88.3% | 58.3% |
| 3388100 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.50 | 37.0 | 2.42e-01 | 81.8% | 31.2% |