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NC_051679.1__YP_009959344.1__I5H59_gp79__00079
Bact-VirNC_051679.1__YP_009959344.1__I5H59_gp79__00079
Identity
- Accession:
- NC_051679 ↗
- Kingdom:
- phage
Quality
85.2
mean pLDDT
Taxonomy
TaxID: 2591129
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-95
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f06A00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.58 | 33.0 | 2.82e-01 | 78.9% | 33.3% |
| 1j3mA00 | 3.30.310.70 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TT1751-like domain | 0.57 | 45.0 | 4.04e-01 | 85.6% | 87.4% |
| 6wubf01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.56 | 37.0 | 3.72e-01 | 78.9% | 64.9% |
| 3w1hA01 | 3.90.1150.110 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.56 | 43.0 | 3.51e-01 | 85.6% | 52.4% |
| 3wa2X01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 41.0 | 4.23e-01 | 78.9% | 81.6% |
| 1y7pB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 36.0 | 3.83e-01 | 100.0% | 77.5% |
| 5ig0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 39.0 | 3.47e-01 | 78.9% | 92.4% |
| 1vr8A00 | 3.40.1000.20 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like | 0.52 | 42.0 | 3.74e-01 | 88.9% | 87.4% |
| 8d8lF01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.52 | 37.0 | 3.38e-01 | 98.9% | 54.5% |
| 1b7eA01 | 3.90.350.10 | Alpha Beta › Alpha-Beta Complex › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 | 0.52 | 44.0 | 3.27e-01 | 95.6% | 35.4% |
| 2r4iA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 38.0 | 3.48e-01 | 78.9% | 91.9% |
| 2nyiA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.50 | 33.0 | 3.49e-01 | 75.6% | 74.1% |
| 4y6iA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 36.0 | 3.49e-01 | 100.0% | 66.0% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4163850 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.60 | 41.0 | 4.19e-01 | 70.0% | 81.2% |
| 4256472 | 3016.1.1.11 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SelA | 0.59 | 45.0 | 4.33e-01 | 84.4% | 90.5% |
| 3905418 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.58 | 40.0 | 3.54e-01 | 76.7% | 49.2% |
| 3249882 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.56 | 42.0 | 4.22e-01 | 81.1% | 97.9% |
| 4987915 | 331.5.1.1 ↗ | a+b two layers › TBP-like › TT1751-like › TT1751-like › DUF302 | 0.55 | 46.0 | 4.11e-01 | 91.1% | 84.0% |
| 3329736 | 304.9.1.97 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RBD_DEAH11 | 0.53 | 38.0 | 3.42e-01 | 78.9% | 53.6% |
| 3718419 | 330.1.1.22 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 | 0.53 | 44.0 | 3.56e-01 | 93.3% | 82.6% |
| 4961623 | 304.8.1.115 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › T2SSM_b | 0.53 | 39.0 | 3.96e-01 | 95.6% | 76.7% |
| 3700854 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.53 | 35.0 | 3.20e-01 | 75.6% | 50.8% |
| 2986050 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.52 | 37.0 | 3.30e-01 | 98.9% | 51.1% |
| 3413626 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 33.0 | 3.03e-01 | 74.4% | 46.7% |
| 3759486 | 330.1.1.2 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5 | 0.52 | 35.0 | 3.67e-01 | 83.3% | 77.5% |
| 3413365 | 220.1.1.27 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD | 0.52 | 38.0 | 3.20e-01 | 78.9% | 48.8% |
| 6389 | 243.1.1.28 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 | 0.51 | 38.0 | 3.48e-01 | 78.9% | 92.6% |
| 4436655 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.51 | 38.0 | 3.39e-01 | 100.0% | 56.0% |
| 3514476 | 220.1.1.27 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD | 0.51 | 38.0 | 3.04e-01 | 77.8% | 45.1% |
| 3254260 | 2011.1.1.21 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Gaa1 | 0.51 | 45.0 | 3.14e-01 | 100.0% | 90.4% |
| 3297936 | 211.1.1.21 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › At5g48480-like_N | 0.50 | 33.0 | 3.60e-01 | 98.9% | 81.3% |