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NC_051726.1__YP_009964131.1__I5J36_gp21__00021

Bact-Vir

NC_051726.1__YP_009964131.1__I5J36_gp21__00021

Identity

Accession:
NC_051726 ↗
Kingdom:
phage

Quality

74.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 165-191_219-288
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z54A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 42.0 3.80e-01 78.4% 78.8%
3k67A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 42.0 3.62e-01 79.4% 80.1%
2uurA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 41.0 3.26e-01 79.4% 48.1%
1nnvA01 3.10.450.140 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › dsDNA mimic, putative 0.52 33.0 3.34e-01 83.5% 63.0%
5tkyA04 2.60.34.10 Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › Substrate Binding Domain Of DNAk; Chain A, domain 1 0.52 45.0 4.32e-01 100.0% 89.7%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4395120 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.54 28.0 3.25e-01 100.0% 68.1%
4653384 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.51 27.0 3.18e-01 96.9% 76.7%
3967754 3772.1.1.1 beta sandwiches › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › FecR 0.51 37.0 3.55e-01 85.6% 65.0%
D2 medium residues 103-164
PDB
D3 medium residues 196-216_289-423
PDB
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3833435 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.72 62.0 4.20e-01 89.7% 47.8%
3984121 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.54 43.0 3.17e-01 85.3% 62.4%
4567319 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.53 42.0 3.08e-01 84.0% 59.5%