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NC_052654.1__YP_009984965.1__JR319_gp217__00128

Bact-Vir

NC_052654.1__YP_009984965.1__JR319_gp217__00128

Identity

Accession:
NC_052654 ↗
Kingdom:
phage

Quality

70.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 14-110
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1q5qH00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.85 64.0 4.74e-01 78.4% 45.1%
6z46V01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.74 63.0 4.97e-01 96.9% 47.3%
1crnA00 3.30.1350.10 Alpha Beta › 2-Layer Sandwich › Crambin › Thionin-like 0.62 27.0 3.69e-01 70.1% 82.6%
2vmaA00 1.20.81.30 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F 0.53 38.0 3.57e-01 76.3% 63.9%
2akjA02 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.51 35.0 2.85e-01 70.1% 83.9%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3487901 4263.2.1.0 a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.57 34.0 3.80e-01 74.2% 76.0%