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NC_052969.1__YP_009997161.1__JT311_gp27__00027
Bact-VirNC_052969.1__YP_009997161.1__JT311_gp27__00027
Identity
- Accession:
- NC_052969 ↗
- Kingdom:
- phage
Quality
81.8
mean pLDDT
Taxonomy
TaxID: 2218618
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-60
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02796.22 best | HTH_7 | 34.1 | 3.40e-08 | 93.3% | 75.6% |
| PF13384.13 | HTH_23 | 27.5 | 2.80e-06 | 93.3% | 56.0% |
CATH (92)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.93 | 81.0 | 6.96e-01 | 93.3% | 77.6% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.92 | 75.0 | 6.78e-01 | 86.7% | 82.8% |
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.92 | 76.0 | 7.12e-01 | 91.1% | 74.1% |
| 3iuoA00 | 1.10.10.1390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ | 0.92 | 83.0 | 6.11e-01 | 100.0% | 45.0% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 78.0 | 7.09e-01 | 93.3% | 87.9% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 76.0 | 6.97e-01 | 91.1% | 89.3% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 75.0 | 6.22e-01 | 91.1% | 66.7% |
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.89 | 74.0 | 4.68e-01 | 91.1% | 24.3% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 74.0 | 6.25e-01 | 91.1% | 69.4% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 74.0 | 6.55e-01 | 91.1% | 69.8% |
| 1l3lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 73.0 | 6.47e-01 | 91.1% | 81.0% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 75.0 | 6.09e-01 | 93.3% | 60.0% |
| 1tc3C00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.88 | 74.0 | 7.07e-01 | 91.1% | 80.4% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 77.0 | 7.23e-01 | 97.8% | 90.7% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 71.0 | 5.76e-01 | 88.9% | 53.8% |
| 3c57B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 71.0 | 6.88e-01 | 88.9% | 85.7% |
| 2w48B01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.86 | 76.0 | 7.27e-01 | 100.0% | 96.2% |
| 1umqA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.86 | 73.0 | 6.64e-01 | 95.6% | 80.0% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 73.0 | 6.23e-01 | 93.3% | 72.9% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 69.0 | 6.11e-01 | 88.9% | 67.2% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.85 | 72.0 | 6.79e-01 | 95.6% | 81.8% |
| 1k78A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 73.0 | 6.39e-01 | 95.6% | 68.2% |
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.85 | 70.0 | 7.08e-01 | 95.6% | 91.1% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 70.0 | 5.58e-01 | 91.1% | 57.5% |
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.84 | 73.0 | 5.24e-01 | 100.0% | 34.9% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.84 | 72.0 | 6.73e-01 | 95.6% | 78.6% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 69.0 | 6.10e-01 | 91.1% | 67.7% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.82 | 71.0 | 6.68e-01 | 100.0% | 85.7% |
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 67.0 | 6.07e-01 | 91.1% | 72.1% |
| 2llkA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.82 | 67.0 | 6.98e-01 | 91.1% | 100.0% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 67.0 | 6.06e-01 | 93.3% | 73.0% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 68.0 | 5.70e-01 | 93.3% | 63.2% |
| 2lvsA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.81 | 69.0 | 6.75e-01 | 95.6% | 91.8% |
| 1xd7A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 67.0 | 5.00e-01 | 95.6% | 41.4% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 67.0 | 6.52e-01 | 93.3% | 94.0% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.81 | 65.0 | 5.12e-01 | 91.1% | 46.8% |
| 2q0oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 71.0 | 6.22e-01 | 100.0% | 83.6% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.80 | 70.0 | 4.28e-01 | 97.8% | 19.5% |
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.80 | 68.0 | 4.73e-01 | 95.6% | 44.7% |
| 2k9qA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.80 | 54.0 | 5.71e-01 | 71.1% | 85.0% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 70.0 | 6.59e-01 | 100.0% | 88.9% |
| 5y9sC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 64.0 | 5.26e-01 | 91.1% | 54.9% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 67.0 | 5.97e-01 | 100.0% | 74.6% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 64.0 | 5.16e-01 | 91.1% | 52.9% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.78 | 66.0 | 5.55e-01 | 97.8% | 61.5% |
| 3k9tA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 65.0 | 5.75e-01 | 95.6% | 68.2% |
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 69.0 | 6.13e-01 | 100.0% | 77.8% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 64.0 | 5.13e-01 | 93.3% | 50.6% |
| 4izzB02 | 1.10.10.1680 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain | 0.77 | 65.0 | 5.80e-01 | 100.0% | 70.6% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 64.0 | 5.88e-01 | 100.0% | 76.2% |
| 1jhgA00 | 1.10.1270.10 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like | 0.76 | 66.0 | 5.14e-01 | 100.0% | 50.5% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 62.0 | 5.03e-01 | 93.3% | 53.4% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 67.0 | 5.71e-01 | 100.0% | 69.4% |
| 4pu7A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.76 | 55.0 | 4.72e-01 | 77.8% | 50.7% |
| 1b9mB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 64.0 | 5.02e-01 | 97.8% | 57.6% |
| 3op9A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 55.0 | 4.73e-01 | 77.8% | 54.4% |
| 1etkA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.74 | 65.0 | 5.53e-01 | 100.0% | 62.7% |
| 3dv8A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 63.0 | 5.31e-01 | 97.8% | 70.5% |
| 6sdkA01 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.74 | 60.0 | 4.69e-01 | 95.6% | 42.3% |
| 2m8gX00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.74 | 64.0 | 5.61e-01 | 100.0% | 65.7% |
| 2cobA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.74 | 60.0 | 6.12e-01 | 93.3% | 95.5% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.74 | 64.0 | 4.61e-01 | 97.8% | 37.4% |
| 2hr3D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 64.0 | 5.81e-01 | 100.0% | 79.0% |
| 4pcqA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 61.0 | 5.91e-01 | 93.3% | 92.0% |
| 6rnzA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.73 | 56.0 | 4.90e-01 | 84.4% | 56.1% |
| 3e7lA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.73 | 62.0 | 5.73e-01 | 100.0% | 78.3% |
| 2y75A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 59.0 | 4.47e-01 | 100.0% | 42.4% |
| 3cecA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.72 | 55.0 | 4.32e-01 | 84.4% | 40.7% |
| 2hyjA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 56.0 | 5.62e-01 | 86.7% | 97.8% |
| 8dtqA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.71 | 55.0 | 4.43e-01 | 82.2% | 78.0% |
| 3bs3A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.71 | 55.0 | 4.93e-01 | 82.2% | 96.7% |
| 2jrtA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 57.0 | 4.81e-01 | 97.8% | 70.9% |
| 3ni7A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.71 | 61.0 | 4.12e-01 | 100.0% | 55.7% |
| 1ojlA03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 56.0 | 5.58e-01 | 91.1% | 87.2% |
| 2auwB02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 56.0 | 4.81e-01 | 91.1% | 55.7% |
| 5cz2G00 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.70 | 53.0 | 5.52e-01 | 95.6% | 95.1% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 59.0 | 4.96e-01 | 93.3% | 57.9% |
| 3ivpD01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 52.0 | 4.41e-01 | 77.8% | 46.7% |
| 3mklA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 60.0 | 4.60e-01 | 97.8% | 44.2% |
| 4yg1A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 51.0 | 4.34e-01 | 77.8% | 51.4% |
| 3cuoD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 58.0 | 4.68e-01 | 100.0% | 51.1% |
| 3i71B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 48.0 | 4.47e-01 | 73.3% | 62.1% |
| 2r3sB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 58.0 | 4.91e-01 | 100.0% | 60.5% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.68 | 57.0 | 5.07e-01 | 93.3% | 67.7% |
| 3mczA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 57.0 | 4.81e-01 | 100.0% | 58.5% |
| 1k6yA01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.67 | 53.0 | 5.31e-01 | 95.6% | 89.1% |
| 2ao9I01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 55.0 | 4.60e-01 | 100.0% | 55.2% |
| 3cuqB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 55.0 | 4.93e-01 | 100.0% | 72.5% |
| 2v9kA01 | 1.10.10.2050 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.66 | 56.0 | 5.44e-01 | 91.1% | 100.0% |
| 1b0nA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.65 | 51.0 | 3.94e-01 | 88.9% | 64.1% |
| 2oi8A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 50.0 | 3.43e-01 | 100.0% | 26.6% |
| 3g7dA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 50.0 | 4.06e-01 | 93.3% | 100.0% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4992594 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.95 | 81.0 | 8.14e-01 | 93.3% | 91.1% |
| 5057202 | 101.1.3.8 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 | 0.93 | 86.0 | 7.23e-01 | 97.8% | 75.7% |
| 5002577 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.93 | 84.0 | 5.97e-01 | 97.8% | 38.3% |
| 3988145 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.93 | 79.0 | 7.60e-01 | 91.1% | 82.0% |
| 5056682 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 83.0 | 6.94e-01 | 95.6% | 75.7% |
| 3640035 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 80.0 | 6.30e-01 | 93.3% | 49.4% |
| 4993585 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 74.0 | 6.63e-01 | 88.9% | 65.0% |
| 4979402 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.92 | 81.0 | 7.27e-01 | 95.6% | 76.7% |
| 3922450 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 75.0 | 7.93e-01 | 91.1% | 100.0% |
| 3589152 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 80.0 | 8.01e-01 | 93.3% | 93.3% |
| 4987653 | 101.1.2.139 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_23 | 0.92 | 80.0 | 8.00e-01 | 93.3% | 93.3% |
| 3953111 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.91 | 83.0 | 7.07e-01 | 100.0% | 78.6% |
| 3947091 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.91 | 80.0 | 7.12e-01 | 93.3% | 86.7% |
| 4008147 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.91 | 79.0 | 6.86e-01 | 93.3% | 73.8% |
| 4139052 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 77.0 | 6.36e-01 | 91.1% | 57.3% |
| 3278040 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 80.0 | 7.20e-01 | 95.6% | 71.7% |
| 3589359 | 101.1.1.68 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 | 0.91 | 75.0 | 7.94e-01 | 91.1% | 100.0% |
| 3942478 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.91 | 78.0 | 7.28e-01 | 93.3% | 89.1% |
| 3232498 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 78.0 | 6.62e-01 | 93.3% | 61.4% |
| 4986612 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.90 | 72.0 | 7.30e-01 | 86.7% | 86.7% |
| 4054648 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 83.0 | 7.69e-01 | 100.0% | 81.8% |
| 4973199 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.90 | 78.0 | 7.08e-01 | 95.6% | 73.3% |
| 5078377 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 76.0 | 7.32e-01 | 91.1% | 86.0% |
| 3976103 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.90 | 78.0 | 6.77e-01 | 93.3% | 78.5% |
| 3962903 | 101.1.2.486 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_58 | 0.90 | 74.0 | 7.73e-01 | 88.9% | 100.0% |
| 4946254 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 77.0 | 7.78e-01 | 100.0% | 93.3% |
| 5043241 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 73.0 | 7.71e-01 | 93.3% | 100.0% |
| 3283589 | 101.1.1.368 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 | 0.90 | 79.0 | 7.67e-01 | 100.0% | 88.0% |
| 3968864 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.90 | 78.0 | 6.41e-01 | 93.3% | 64.0% |
| 3941460 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.90 | 77.0 | 6.74e-01 | 93.3% | 84.6% |
| 3590541 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.90 | 75.0 | 4.87e-01 | 91.1% | 23.9% |
| 4929382 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 76.0 | 7.07e-01 | 93.3% | 80.0% |
| 3944309 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.89 | 77.0 | 7.43e-01 | 93.3% | 94.0% |
| 4952807 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.89 | 80.0 | 6.70e-01 | 100.0% | 62.7% |
| 4927434 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 80.0 | 8.04e-01 | 100.0% | 97.8% |
| 5070354 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.89 | 79.0 | 6.40e-01 | 97.8% | 57.5% |
| 4031535 | 101.1.1.275 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GerE | 0.89 | 74.0 | 6.69e-01 | 91.1% | 71.7% |
| 5063318 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.89 | 78.0 | 7.29e-01 | 97.8% | 80.0% |
| 4143289 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.89 | 77.0 | 7.19e-01 | 95.6% | 87.3% |
| 4031756 | 101.1.2.645 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_40 | 0.89 | 76.0 | 6.04e-01 | 93.3% | 52.9% |
| 3942922 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.88 | 72.0 | 5.90e-01 | 91.1% | 52.0% |
| 3477795 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.88 | 70.0 | 7.04e-01 | 86.7% | 91.1% |
| 4990647 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 79.0 | 7.32e-01 | 100.0% | 80.0% |
| 4970998 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.88 | 74.0 | 5.65e-01 | 93.3% | 44.0% |
| 4198219 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 74.0 | 7.41e-01 | 91.1% | 91.1% |
| 4010017 | 101.1.1.68 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 | 0.88 | 80.0 | 6.82e-01 | 100.0% | 72.9% |
| 4008046 | 101.1.1.348 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF30461 | 0.88 | 76.0 | 7.37e-01 | 95.6% | 86.0% |
| 5003692 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.88 | 77.0 | 6.75e-01 | 97.8% | 70.8% |
| 5030780 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.87 | 78.0 | 7.56e-01 | 100.0% | 94.0% |
| 4385054 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 70.0 | 7.36e-01 | 88.9% | 100.0% |
| 4927516 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 74.0 | 6.70e-01 | 93.3% | 75.0% |
| 3945880 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.87 | 77.0 | 7.17e-01 | 97.8% | 81.8% |
| 3597464 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 81.0 | 7.23e-01 | 100.0% | 81.7% |
| 4470400 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 70.0 | 6.05e-01 | 91.1% | 61.4% |
| 3505559 | 101.1.6.19 ↗ | alpha arrays › HTH › HTH › TrpR › PAX | 0.86 | 74.0 | 6.16e-01 | 95.6% | 60.0% |
| 1159643 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.85 | 72.0 | 6.21e-01 | 95.6% | 63.4% |
| 3989075 | 101.1.3.11 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_ISL3 | 0.85 | 65.0 | 6.86e-01 | 86.7% | 100.0% |
| 5043001 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.85 | 77.0 | 5.76e-01 | 100.0% | 45.7% |
| 3753093 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.85 | 71.0 | 6.30e-01 | 93.3% | 64.6% |
| 3789627 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 73.0 | 6.41e-01 | 95.6% | 70.8% |
| 5043242 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.84 | 76.0 | 6.08e-01 | 100.0% | 58.3% |
| 3288236 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.84 | 69.0 | 5.46e-01 | 91.1% | 52.2% |
| 5077769 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.84 | 74.0 | 7.20e-01 | 100.0% | 92.0% |
| 4958468 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.83 | 71.0 | 6.48e-01 | 95.6% | 93.3% |
| 5006645 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.83 | 72.0 | 6.50e-01 | 95.6% | 75.0% |
| 4162857 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.83 | 70.0 | 6.84e-01 | 97.8% | 86.0% |
| 3243649 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.83 | 72.0 | 5.72e-01 | 97.8% | 75.6% |
| 4952035 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.83 | 76.0 | 6.82e-01 | 100.0% | 75.0% |
| 3590885 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 72.0 | 6.12e-01 | 95.6% | 64.3% |
| 3693390 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.83 | 69.0 | 6.35e-01 | 95.6% | 76.7% |
| 5007028 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.82 | 74.0 | 6.95e-01 | 100.0% | 83.6% |
| 3991300 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 72.0 | 5.85e-01 | 95.6% | 57.5% |
| 3879118 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.82 | 73.0 | 6.86e-01 | 100.0% | 83.6% |
| 3587644 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.82 | 68.0 | 6.26e-01 | 95.6% | 71.7% |
| 4262428 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.82 | 70.0 | 4.20e-01 | 97.8% | 16.1% |
| 3391053 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 68.0 | 6.82e-01 | 93.3% | 95.6% |
| 3693312 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 67.0 | 6.16e-01 | 95.6% | 73.3% |
| 3589364 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.81 | 69.0 | 4.90e-01 | 97.8% | 37.8% |
| 4008959 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 65.0 | 6.21e-01 | 100.0% | 76.4% |
| 4133358 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.81 | 70.0 | 4.82e-01 | 100.0% | 31.6% |
| 4943227 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.80 | 68.0 | 6.87e-01 | 95.6% | 100.0% |
| 3971636 | 101.28.1.0 ↗ | alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins | 0.80 | 64.0 | 6.67e-01 | 95.6% | 100.0% |
| 3410877 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 68.0 | 5.92e-01 | 97.8% | 64.3% |
| 4965811 | 101.1.1.559 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF7858 | 0.79 | 67.0 | 6.21e-01 | 100.0% | 83.3% |
| 3282047 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.78 | 68.0 | 5.30e-01 | 100.0% | 51.0% |
| 5051680 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.78 | 64.0 | 5.33e-01 | 93.3% | 53.8% |
| 4142399 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.78 | 65.0 | 5.15e-01 | 93.3% | 52.2% |
| 3289370 | 101.1.1.300 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 | 0.77 | 67.0 | 5.19e-01 | 100.0% | 49.0% |
| 4480726 | 101.1.1.300 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 | 0.77 | 63.0 | 6.11e-01 | 93.3% | 84.0% |
| 4501735 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 65.0 | 5.52e-01 | 100.0% | 58.7% |
| 3944389 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.76 | 66.0 | 5.40e-01 | 100.0% | 57.6% |
| 3286340 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.76 | 67.0 | 5.28e-01 | 100.0% | 50.5% |
| 3971281 | 101.1.1.18 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 | 0.76 | 66.0 | 6.24e-01 | 100.0% | 83.6% |
| 3958970 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.76 | 62.0 | 5.19e-01 | 93.3% | 58.7% |
| 4642479 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.76 | 66.0 | 5.20e-01 | 100.0% | 51.6% |
| 3338097 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 67.0 | 6.24e-01 | 100.0% | 83.6% |
| 3587017 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.75 | 61.0 | 6.20e-01 | 93.3% | 97.8% |
| 3983783 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.74 | 63.0 | 5.01e-01 | 100.0% | 50.5% |
| 3955106 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.72 | 62.0 | 5.02e-01 | 100.0% | 54.4% |
D2
high
residues 68-125
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hfvA02 | 6.10.280.170 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Substrate of the Dot/Icm secretion system | 0.58 | 47.0 | 4.38e-01 | 100.0% | 70.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3269634 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.71 | 56.0 | 5.62e-01 | 86.2% | 93.3% |
| 3930506 | 170.1.1.0 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C | 0.64 | 43.0 | 4.33e-01 | 70.7% | 71.7% |
| 3801790 | 109.4.1.2901 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N, Xpo1, TPR_TNPO3_IPO13_2nd | 0.58 | 39.0 | 2.38e-01 | 70.7% | 21.8% |
| 3540919 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 49.0 | 4.38e-01 | 96.6% | 84.7% |
| 4326979 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.55 | 39.0 | 3.97e-01 | 86.2% | 80.0% |
| 4145940 | 140.1.1.14 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e | 0.51 | 45.0 | 3.04e-01 | 98.3% | 36.2% |