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NC_052972.1__YP_009997386.1__JT314_gp05__00005

Bact-Vir

NC_052972.1__YP_009997386.1__JT314_gp05__00005

Identity

Accession:
NC_052972 ↗
Kingdom:
phage

Quality

66.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Casjensviridae› Ruegeria_phage_vB_RpoS-V7

TaxID: 2218620

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-92
PDB
D2 high residues 97-206
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qggA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.56 37.0 4.14e-01 86.4% 89.2%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 28.0 3.56e-01 83.6% 98.2%
1a1rA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.50 27.0 3.03e-01 93.6% 64.7%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4611708 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.67 31.0 4.01e-01 83.6% 78.3%
4116921 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.67 31.0 4.07e-01 83.6% 80.0%
4347999 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.67 33.0 4.17e-01 80.9% 80.0%
5033075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 33.0 4.53e-01 83.6% 96.4%
3839849 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.65 31.0 3.94e-01 82.7% 76.9%
3989139 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.64 31.0 3.95e-01 83.6% 78.5%
4662947 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.64 32.0 4.00e-01 80.9% 80.0%
4998726 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 33.0 3.82e-01 80.0% 68.8%
4995901 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 33.0 4.35e-01 80.0% 100.0%
4930861 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.60 31.0 3.86e-01 85.5% 83.1%
3233534 2004.1.1.164 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc 0.56 34.0 2.82e-01 93.6% 32.2%
3484822 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.56 35.0 3.96e-01 70.9% 86.3%