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NC_052972.1__YP_009997405.1__JT314_gp24__00024

Bact-Vir

NC_052972.1__YP_009997405.1__JT314_gp24__00024

Identity

Accession:
NC_052972 ↗
Kingdom:
phage

Quality

84.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-57
PDB
D2 high residues 66-168
PDB
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1d5rA02 2.60.40.1110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 56.0 5.15e-01 92.2% 91.7%
3l5iA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 46.0 4.90e-01 71.8% 95.5%
1f6fB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 45.0 4.62e-01 72.8% 91.8%
3v6oB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 45.0 4.59e-01 73.8% 94.0%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.63 51.0 4.55e-01 100.0% 60.7%
2dmkA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 43.0 4.35e-01 72.8% 88.3%
5yxkA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 43.0 4.21e-01 71.8% 94.5%
3w57A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.60 50.0 4.92e-01 91.3% 91.0%
4v2bA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 43.0 4.29e-01 74.8% 84.0%
5k6wA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 41.0 4.47e-01 71.8% 86.0%
4npjB01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.59 49.0 4.49e-01 91.3% 77.1%
1fy7A02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 49.0 4.48e-01 89.3% 82.1%
2cjsA01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.59 49.0 4.31e-01 90.3% 77.8%
2yrbA01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.59 48.0 4.44e-01 90.3% 90.4%
3nqzA01 3.10.450.490 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 38.0 3.99e-01 88.3% 73.6%
1cjyA01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.58 49.0 4.57e-01 91.3% 89.7%
1rhfA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 41.0 4.44e-01 72.8% 89.4%
4fx5A01 2.60.40.3670 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 40.0 3.63e-01 71.8% 86.6%
1bquA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 46.0 4.66e-01 98.1% 88.0%
2j73A00 2.60.40.1110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 48.0 4.81e-01 93.2% 96.1%
4ua3A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 48.0 3.94e-01 94.2% 95.7%
3eo4D00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 46.0 3.98e-01 90.3% 100.0%
2rfrA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 42.0 3.68e-01 82.5% 64.3%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 32.0 3.65e-01 86.4% 80.0%
2chcC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 47.0 4.13e-01 100.0% 80.5%
4f8lA00 2.60.40.3590 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 37.0 3.43e-01 72.8% 90.6%
4xrtA02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 46.0 4.07e-01 100.0% 86.9%
1hqz800 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.53 37.0 3.48e-01 73.8% 68.9%
4hkqA04 3.10.20.370 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.52 34.0 3.89e-01 77.7% 89.5%
4ckmB00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.52 36.0 3.22e-01 71.8% 94.4%
3blzA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 3.73e-01 81.6% 90.3%
1g5hA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.51 46.0 3.36e-01 100.0% 86.9%
3dbxA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.51 41.0 3.49e-01 100.0% 51.1%
4fczA00 3.10.450.710 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Tgt2/MlaC 0.51 39.0 3.28e-01 83.5% 81.4%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 43.0 3.62e-01 95.1% 83.3%
6u5uG07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.50 45.0 4.14e-01 99.0% 81.1%
2a1vA00 3.90.1150.30 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.50 41.0 3.75e-01 95.1% 65.9%
4a2bA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.50 37.0 3.40e-01 78.6% 64.5%
4akmB00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.50 43.0 3.74e-01 93.2% 89.2%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3491648 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.65 50.0 4.70e-01 81.6% 92.8%
3709499 11.2.1.8 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PTEN_C2 0.65 55.0 5.11e-01 92.2% 93.8%
4027096 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.65 54.0 5.03e-01 90.3% 93.8%
3740587 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.63 52.0 5.14e-01 90.3% 83.5%
3863780 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.63 48.0 4.08e-01 81.6% 89.4%
3319706 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.62 52.0 4.84e-01 91.3% 85.4%
3781393 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.62 35.0 3.84e-01 74.8% 66.7%
3248334 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.62 52.0 4.85e-01 91.3% 86.2%
3740861 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.62 52.0 4.66e-01 91.3% 92.4%
3738638 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.62 52.0 4.33e-01 91.3% 74.4%
3232218 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.61 50.0 4.14e-01 87.4% 82.8%
3833687 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.61 51.0 4.57e-01 90.3% 72.4%
3728840 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.61 50.0 4.53e-01 90.3% 82.8%
3291935 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.61 53.0 4.76e-01 94.2% 87.1%
4027344 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.61 52.0 4.93e-01 92.2% 94.2%
3249011 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.61 51.0 4.59e-01 90.3% 84.3%
3271857 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.61 49.0 3.77e-01 87.4% 65.5%
3864920 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.60 52.0 4.23e-01 94.2% 80.5%
4027058 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.60 50.0 4.34e-01 90.3% 90.6%
5053301 206.1.3.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.60 46.0 3.17e-01 78.6% 83.6%
4874611 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.60 49.0 4.50e-01 86.4% 83.8%
3822427 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.60 52.0 4.98e-01 94.2% 90.8%
4021192 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.60 51.0 4.58e-01 91.3% 78.6%
3712315 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.60 52.0 4.49e-01 96.1% 79.4%
4966333 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 38.0 4.51e-01 80.6% 100.0%
4030649 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.60 51.0 3.24e-01 92.2% 26.9%
3595908 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.60 50.0 4.63e-01 90.3% 88.5%
3787693 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.60 50.0 4.13e-01 90.3% 74.4%
3454288 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.60 48.0 4.11e-01 87.4% 83.5%
3251950 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.60 51.0 4.69e-01 93.2% 91.7%
4028144 11.2.1.101 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF29403 0.60 51.0 4.49e-01 94.2% 71.0%
5050920 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.60 48.0 3.85e-01 87.4% 90.2%
3801555 213.1.1.34 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_13 0.59 48.0 3.90e-01 87.4% 85.1%
2526315 7075.1.1.1 a+b two layers › uncharacterized protein SAMEA2273162_06031 › uncharacterized protein SAMEA2273162_06031 › uncharacterized protein SAMEA2273162_06031 › PF31209 0.59 51.0 4.57e-01 99.0% 76.8%
3266223 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.59 50.0 4.63e-01 93.2% 90.2%
3444131 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.59 50.0 4.49e-01 94.2% 85.1%
4932706 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.59 43.0 2.68e-01 75.7% 22.3%
3897496 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 41.0 4.50e-01 73.8% 91.8%
3457300 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.59 49.0 3.12e-01 93.2% 83.9%
4496866 11.2.1.9 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2-C2_1 0.58 48.0 4.15e-01 90.3% 72.7%
5073876 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.58 44.0 2.89e-01 79.6% 28.1%
4947567 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 44.0 2.89e-01 79.6% 28.4%
3988638 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 43.0 4.41e-01 80.6% 80.0%
5079259 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.58 41.0 2.89e-01 71.8% 37.2%
3491615 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.58 48.0 3.65e-01 90.3% 43.6%
3609659 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.58 50.0 4.24e-01 94.2% 77.6%
3577632 213.1.1.5 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › MOZ_SAS 0.58 48.0 4.33e-01 90.3% 75.2%
3592720 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.58 51.0 3.61e-01 97.1% 42.8%
3542698 11.2.1.114 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2, C2-C2_1 0.58 48.0 3.45e-01 91.3% 38.7%
3534496 213.1.1.5 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › MOZ_SAS 0.58 48.0 4.30e-01 90.3% 73.8%
4476440 2004.1.1.1156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15, AAA_23, SbcC_Walker_B 0.58 44.0 3.06e-01 80.6% 35.7%
3316932 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.58 49.0 3.99e-01 92.2% 62.6%
3790217 213.1.1.34 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_13 0.57 48.0 3.91e-01 90.3% 77.4%
4320633 2004.1.1.433 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 0.57 44.0 2.89e-01 80.6% 28.8%
4023601 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.57 49.0 4.11e-01 94.2% 85.7%
3488488 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.57 51.0 3.98e-01 100.0% 89.1%
3235935 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.56 48.0 4.45e-01 94.2% 88.1%
5050460 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.56 47.0 3.84e-01 90.3% 92.6%
3369135 129.1.1.0 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.56 49.0 2.88e-01 96.1% 55.5%
3680606 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.56 47.0 3.19e-01 91.3% 30.5%
4963648 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.56 42.0 2.71e-01 77.7% 23.5%
4139499 2004.1.1.293 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 0.56 42.0 2.66e-01 77.7% 21.4%
5069317 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.56 43.0 2.85e-01 79.6% 29.6%
4947966 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.56 47.0 4.02e-01 93.2% 100.0%
3740184 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.56 46.0 4.09e-01 88.3% 86.2%
5031205 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.56 47.0 3.89e-01 93.2% 92.0%
4979282 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.55 46.0 3.90e-01 93.2% 96.1%
169213 213.1.1.25 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.55 46.0 3.97e-01 90.3% 99.4%
4946190 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 40.0 3.97e-01 84.5% 73.3%
3998469 213.1.1.31 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 0.54 42.0 3.79e-01 84.5% 89.7%
4010148 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.54 45.0 3.79e-01 93.2% 94.4%
5072937 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.53 45.0 3.84e-01 93.2% 98.8%
3249235 213.1.1.31 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 0.53 47.0 4.01e-01 99.0% 95.3%
3407032 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 43.0 2.89e-01 87.4% 40.8%
4091363 213.1.1.75 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FemAB, Acetyltransf_6 0.51 46.0 3.73e-01 100.0% 83.9%
3266335 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.51 39.0 4.11e-01 95.1% 93.3%
4011270 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.50 33.0 3.32e-01 74.8% 65.7%