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NC_052975.1__YP_009997682.1__JT317_gp67__00067
Bact-VirNC_052975.1__YP_009997682.1__JT317_gp67__00067
Identity
- Accession:
- NC_052975 ↗
- Kingdom:
- phage
Quality
83.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Casjensviridae›
Seodaemunguvirus›
Klebsiella_phage_YMC16/01/N133_KPN_BP
TaxID: 2026102
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 233-361
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cipA02 | 1.10.400.10 | Mainly Alpha › Orthogonal Bundle › GI Alpha 1, domain 2-like › GI Alpha 1, domain 2-like | 0.55 | 32.0 | 3.38e-01 | 97.7% | 62.2% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033827 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.93 | 82.0 | 8.57e-01 | 93.8% | 97.5% |
| 3556708 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.52 | 30.0 | 3.74e-01 | 82.2% | 98.7% |
D2
high
residues 488-575
Domain cluster:
rep: MN592897.1__QGT52237.1__X__00012__D438-512
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3947107 | 101.1.4.47 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF1456 | 0.59 | 29.0 | 3.09e-01 | 72.7% | 50.7% |
| 2759971 | 376.1.1.37 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C | 0.52 | 35.0 | 3.53e-01 | 70.5% | 71.4% |
D3
high
residues 827-935
Domain cluster:
rep: JN564907.1__AEY69588.1__AH2_00078__00078__D729-823
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5f7qC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 39.0 | 4.74e-01 | 70.6% | 91.4% |
| 1fbqA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 45.0 | 4.97e-01 | 72.5% | 100.0% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 40.0 | 4.10e-01 | 71.6% | 63.8% |
| 3l09A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 41.0 | 4.56e-01 | 72.5% | 82.1% |
| 5deqB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 41.0 | 4.56e-01 | 71.6% | 85.5% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 42.0 | 4.30e-01 | 72.5% | 70.9% |
| 3oovA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.58 | 48.0 | 4.18e-01 | 89.0% | 93.3% |
| 5hvqC01 | 3.90.1150.220 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.58 | 39.0 | 4.39e-01 | 73.4% | 95.0% |
| 4kvxA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 35.0 | 3.14e-01 | 71.6% | 42.8% |
| 2od5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 41.0 | 4.46e-01 | 78.9% | 94.5% |
| 1l3lA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.55 | 45.0 | 3.94e-01 | 89.0% | 85.9% |
| 5l09B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.55 | 45.0 | 3.98e-01 | 89.9% | 90.9% |
| 2l2oA00 | 1.10.10.1540 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain | 0.55 | 37.0 | 4.11e-01 | 72.5% | 89.4% |
| 2pmbA01 | 3.30.1850.10 | Alpha Beta › 2-Layer Sandwich › MCP/YpsA-like › MoCo carrier protein-like | 0.54 | 37.0 | 3.82e-01 | 88.1% | 71.0% |
| 4qdjA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 33.0 | 2.70e-01 | 72.5% | 32.2% |
| 1vm0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.51 | 32.0 | 3.41e-01 | 71.6% | 71.0% |
| 3eeaA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 42.0 | 3.80e-01 | 89.9% | 94.1% |
| 3hx9B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 30.0 | 3.20e-01 | 98.2% | 66.3% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3997569 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 49.0 | 6.01e-01 | 70.6% | 91.4% |
| 3550392 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 44.0 | 3.64e-01 | 72.5% | 37.3% |
| 3488429 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.69 | 43.0 | 3.62e-01 | 72.5% | 37.3% |
| 3989819 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.68 | 43.0 | 5.06e-01 | 72.5% | 93.3% |
| 3485716 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.67 | 43.0 | 3.55e-01 | 72.5% | 36.3% |
| None | — | 0.67 | 42.0 | 3.54e-01 | 72.5% | 37.3% | |
| 3394822 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.66 | 42.0 | 3.47e-01 | 72.5% | 35.4% |
| 5076520 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 42.0 | 4.42e-01 | 72.5% | 70.0% |
| 5062643 | 101.1.2.138 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF3860 | 0.66 | 44.0 | 4.97e-01 | 71.6% | 92.5% |
| 4941839 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 43.0 | 3.95e-01 | 72.5% | 51.0% |
| 3889562 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 45.0 | 4.55e-01 | 72.5% | 90.9% |
| 3412336 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 40.0 | 4.48e-01 | 71.6% | 81.2% |
| 5039038 | 101.1.2.137 ↗ | alpha arrays › HTH › HTH › winged helix domain › OST-HTH | 0.64 | 43.0 | 4.87e-01 | 71.6% | 93.8% |
| 4983791 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.64 | 41.0 | 3.87e-01 | 72.5% | 53.8% |
| 5025840 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 43.0 | 4.54e-01 | 72.5% | 77.0% |
| 4478358 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 45.0 | 4.66e-01 | 74.3% | 96.2% |
| 3355197 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 41.0 | 4.31e-01 | 71.6% | 72.0% |
| 3173225 | 101.1.2.4 ↗ | alpha arrays › HTH › HTH › winged helix domain › Forkhead | 0.61 | 40.0 | 3.80e-01 | 72.5% | 54.8% |
| 3202121 | 213.1.1.27 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 | 0.60 | 35.0 | 2.70e-01 | 71.6% | 26.4% |
| 3223233 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.60 | 55.0 | 4.28e-01 | 100.0% | 86.1% |
| 4069824 | 101.1.9.20 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PhetRS_B1 | 0.60 | 36.0 | 4.03e-01 | 73.4% | 76.5% |
| 3739985 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.58 | 43.0 | 3.90e-01 | 79.8% | 75.5% |
| 3944435 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.56 | 33.0 | 3.93e-01 | 71.6% | 85.3% |
| 2724 | 101.1.2.138 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF3860 | 0.55 | 41.0 | 4.46e-01 | 78.9% | 94.5% |
| 4616161 | 304.8.1.47 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd | 0.55 | 31.0 | 3.15e-01 | 87.2% | 55.2% |
| 3933222 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.55 | 38.0 | 3.45e-01 | 72.5% | 60.0% |
| 3368757 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.54 | 30.0 | 3.21e-01 | 87.2% | 61.1% |
| 3378225 | 304.8.1.47 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd | 0.53 | 29.0 | 3.26e-01 | 87.2% | 68.2% |
| 4515771 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.53 | 30.0 | 3.18e-01 | 78.9% | 60.0% |
| 3679423 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 28.0 | 3.36e-01 | 83.5% | 76.0% |
| 3345132 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.52 | 31.0 | 3.06e-01 | 86.2% | 53.9% |
| 4937637 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.51 | 40.0 | 3.15e-01 | 87.2% | 79.6% |
| 4958551 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.51 | 32.0 | 3.92e-01 | 77.1% | 100.0% |
| 3782500 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.50 | 41.0 | 3.53e-01 | 89.9% | 82.2% |
D4
medium
residues 29-83_108-180
Domain cluster:
representative
D5
medium
residues 84-107_181-214
Domain cluster:
representative
D6
medium
residues 365-378_398-434
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kkbA00 | 1.20.120.880 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain | 0.74 | 54.0 | 4.08e-01 | 80.4% | 54.8% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 53.0 | 5.06e-01 | 88.2% | 91.9% |
| 5mmiJ02 | 1.10.10.250 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain | 0.66 | 38.0 | 3.44e-01 | 74.5% | 42.0% |
| 2vqxA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.64 | 53.0 | 3.78e-01 | 98.0% | 52.1% |
| 2ptfB02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.64 | 48.0 | 4.71e-01 | 84.3% | 91.2% |
| 2hjmA01 | 1.20.120.460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like | 0.64 | 54.0 | 4.64e-01 | 100.0% | 93.0% |
| 3deeA01 | 1.10.150.690 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 | 0.63 | 51.0 | 4.44e-01 | 96.1% | 87.2% |
| 4bgpA01 | 1.20.142.20 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › | 0.61 | 54.0 | 3.98e-01 | 98.0% | 69.3% |
| 2kn6A02 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.60 | 49.0 | 4.35e-01 | 100.0% | 74.4% |
| 2dlaA01 | 1.20.930.50 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.59 | 45.0 | 3.29e-01 | 90.2% | 36.9% |
| 2q2eA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 43.0 | 3.43e-01 | 100.0% | 40.6% |
| 3u4qB04 | 6.10.140.1030 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 40.0 | 3.73e-01 | 80.4% | 71.0% |
| 1fkaG00 | 1.10.455.10 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 | 0.53 | 45.0 | 3.37e-01 | 96.1% | 39.1% |
| 2elcA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.52 | 38.0 | 3.62e-01 | 88.2% | 64.2% |
| 4muoA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.52 | 39.0 | 3.59e-01 | 86.3% | 90.3% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3326571 | 633.12.1.19 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › PF26751, PF26752 | 0.77 | 67.0 | 4.53e-01 | 100.0% | 34.7% |
| 3768175 | 604.3.1.25 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › PF30537 | 0.68 | 55.0 | 5.10e-01 | 100.0% | 70.8% |
| 4009408 | 639.2.1.1 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › YmgB | 0.66 | 56.0 | 5.20e-01 | 100.0% | 97.1% |
| 3584199 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 55.0 | 3.23e-01 | 96.1% | 21.2% |
| 3977558 | 639.2.1.3 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › BDM | 0.64 | 52.0 | 5.13e-01 | 94.1% | 94.5% |
| 4202679 | 4959.1.1.1 ↗ | a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_3 | 0.62 | 50.0 | 3.66e-01 | 100.0% | 91.2% |
| 3986794 | 639.2.1.1 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › YmgB | 0.61 | 52.0 | 4.78e-01 | 100.0% | 92.9% |
| 3609997 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.59 | 49.0 | 3.23e-01 | 96.1% | 26.6% |
| 3882485 | 109.4.1.14 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MyTH4 | 0.59 | 47.0 | 3.31e-01 | 98.0% | 39.5% |
| 3390791 | 2487.1.1.0 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" | 0.58 | 50.0 | 3.43e-01 | 98.0% | 45.0% |
| 3602498 | 604.17.1.1 ↗ | alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like › DUF447_C | 0.58 | 46.0 | 4.47e-01 | 92.2% | 86.7% |
| 4002640 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 44.0 | 2.72e-01 | 90.2% | 14.2% |
| 4847390 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.51 | 41.0 | 3.46e-01 | 94.1% | 86.2% |
| 3228081 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 41.0 | 4.03e-01 | 98.0% | 100.0% |
D7
medium
residues 435-487_576-593
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3s4lA00 | 1.10.3210.30 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › | 0.67 | 46.0 | 3.33e-01 | 71.8% | 74.1% |
| 2w43A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.64 | 39.0 | 4.36e-01 | 73.2% | 77.2% |
| 2ymmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 43.0 | 4.28e-01 | 77.5% | 69.9% |
| 2no4A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 42.0 | 4.12e-01 | 77.5% | 66.7% |
| 4c0aA02 | 1.10.1000.11 | Mainly Alpha › Orthogonal Bundle › Arf Nucleotide-binding Site Opener; domain 2 › Arf Nucleotide-binding Site Opener,domain 2 | 0.61 | 42.0 | 3.53e-01 | 71.8% | 75.4% |
| 2ew2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.60 | 39.0 | 3.17e-01 | 78.9% | 35.1% |
| 2uytA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 38.0 | 2.75e-01 | 71.8% | 91.4% |
| 3ktnA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 38.0 | 2.41e-01 | 71.8% | 20.0% |
| 3d0wA00 | 1.10.760.20 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Protein of unknown function DUF3243 | 0.54 | 38.0 | 3.62e-01 | 74.6% | 62.8% |
| 4jd9G00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.53 | 33.0 | 2.79e-01 | 77.5% | 36.7% |
| 1wy9A00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 37.0 | 3.27e-01 | 76.1% | 96.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4984725 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.62 | 43.0 | 3.07e-01 | 73.2% | 27.9% |
| 4182885 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 35.0 | 3.66e-01 | 77.5% | 66.2% |
| 4161178 | 2003.1.1.76 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › SDH_C | 0.55 | 42.0 | 3.08e-01 | 81.7% | 32.6% |
| 4989896 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.52 | 37.0 | 2.47e-01 | 77.5% | 31.9% |
D8
medium
residues 594-660_737-825
Domain cluster:
representative
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3253892 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.78 | 64.0 | 5.84e-01 | 84.6% | 98.5% |
| 5022020 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.72 | 66.0 | 5.48e-01 | 98.7% | 85.7% |
| 4959586 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.70 | 66.0 | 5.35e-01 | 100.0% | 80.3% |
| 4931926 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 57.0 | 4.50e-01 | 90.4% | 77.1% |
| 4926889 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.51 | 36.0 | 3.21e-01 | 71.8% | 97.7% |
| 5025002 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.50 | 35.0 | 3.06e-01 | 70.5% | 92.1% |
| None | — | 0.50 | 37.0 | 3.00e-01 | 75.0% | 80.4% |
D9
medium
residues 661-736
Domain cluster:
rep: MT121967.1__QIW90016.1__X__00007__D625-685
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19263.6 best | DUF5906 | 37.1 | 6.30e-09 | 100.0% | 65.5% |
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1svmA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 69.0 | 5.45e-01 | 100.0% | 56.9% |
| 1tueD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 65.0 | 4.74e-01 | 100.0% | 36.6% |
| 1amuA02 | 3.40.50.980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.69 | 45.0 | 3.69e-01 | 100.0% | 36.4% |
| 1zq9A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 43.0 | 3.33e-01 | 100.0% | 31.1% |
| 3qldA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.61 | 46.0 | 3.32e-01 | 100.0% | 26.8% |
| 6bzrB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 54.0 | 3.86e-01 | 100.0% | 49.4% |
| 4akgA12 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 52.0 | 4.59e-01 | 100.0% | 65.0% |
| 2f00A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 40.0 | 3.87e-01 | 100.0% | 60.2% |
| 2i7gB00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.60 | 51.0 | 3.39e-01 | 100.0% | 33.3% |
| 1lucA00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.59 | 51.0 | 3.40e-01 | 100.0% | 35.3% |
| 2bo4A01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.59 | 46.0 | 3.52e-01 | 100.0% | 34.9% |
| 6iubA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 51.0 | 3.54e-01 | 100.0% | 84.1% |
| 1hyeA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 46.0 | 3.83e-01 | 100.0% | 46.3% |
| 6fgcA01 | 3.40.980.10 | Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › MoaB/Mog-like domain | 0.58 | 51.0 | 3.92e-01 | 100.0% | 72.4% |
| 1lucB00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.58 | 50.0 | 3.36e-01 | 100.0% | 35.9% |
| 2gdqA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.58 | 45.0 | 3.14e-01 | 100.0% | 24.8% |
| 4j1qA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 49.0 | 3.14e-01 | 100.0% | 35.7% |
| 5z5cA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 41.0 | 3.69e-01 | 100.0% | 53.7% |
| 5kzkA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.57 | 42.0 | 3.35e-01 | 97.4% | 38.5% |
| 2yfkA01 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.57 | 49.0 | 3.76e-01 | 100.0% | 47.6% |
| 4krgA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 50.0 | 3.48e-01 | 100.0% | 41.4% |
| 3qtgA03 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.56 | 38.0 | 3.40e-01 | 100.0% | 47.8% |
| 2oztA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.56 | 49.0 | 3.61e-01 | 100.0% | 47.3% |
| 4uuwA01 | 3.40.980.10 | Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › MoaB/Mog-like domain | 0.55 | 49.0 | 3.77e-01 | 100.0% | 90.1% |
| 4l9yD00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.54 | 47.0 | 3.30e-01 | 100.0% | 58.9% |
| 5buqA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.54 | 37.0 | 2.47e-01 | 100.0% | 14.9% |
| 2plcA00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.54 | 47.0 | 3.24e-01 | 100.0% | 63.1% |
| 4dg8A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.54 | 48.0 | 3.01e-01 | 100.0% | 39.7% |
| 3uwpA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 45.0 | 3.38e-01 | 100.0% | 34.1% |
| 5v8sA02 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.53 | 46.0 | 3.79e-01 | 100.0% | 63.8% |
| 7mjzA01 | 3.40.50.12160 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylthiotransferase, N-terminal domain | 0.53 | 46.0 | 4.02e-01 | 100.0% | 68.0% |
| 3clkB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 47.0 | 4.04e-01 | 100.0% | 64.8% |
| 5gizA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.53 | 47.0 | 3.97e-01 | 100.0% | 71.3% |
| 4lg1B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 46.0 | 3.36e-01 | 100.0% | 49.3% |
| 3p4gD00 | 2.160.20.160 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.52 | 36.0 | 2.47e-01 | 100.0% | 17.6% |
| 3lccA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 45.0 | 3.31e-01 | 100.0% | 49.1% |
| 4cujA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 46.0 | 3.83e-01 | 100.0% | 57.9% |
| 4pxyA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.51 | 44.0 | 3.14e-01 | 100.0% | 36.5% |
| 5ygqA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 43.0 | 3.77e-01 | 100.0% | 64.8% |
| 2p4gA00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.50 | 44.0 | 3.10e-01 | 100.0% | 32.7% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3253892 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.85 | 77.0 | 5.53e-01 | 100.0% | 37.4% |
| 2810781 | 8001.1.1.1 ↗ | alpha arrays › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › PPV_E1_C | 0.78 | 69.0 | 4.89e-01 | 100.0% | 33.5% |
| 4959586 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.76 | 67.0 | 4.56e-01 | 100.0% | 28.7% |
| 5023501 | 2004.1.1.58 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase | 0.75 | 68.0 | 4.61e-01 | 100.0% | 34.2% |
| 4812297 | 2004.1.1.55 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RNA_helicase | 0.72 | 60.0 | 4.53e-01 | 100.0% | 37.5% |
| 4931926 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.72 | 64.0 | 4.21e-01 | 100.0% | 25.1% |
| 5029061 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.71 | 52.0 | 4.31e-01 | 100.0% | 45.4% |
| None | — | 0.70 | 63.0 | 4.83e-01 | 100.0% | 48.2% | |
| None | — | 0.70 | 63.0 | 4.91e-01 | 100.0% | 51.2% | |
| None | — | 0.70 | 63.0 | 4.90e-01 | 100.0% | 51.2% | |
| 5004060 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.69 | 52.0 | 4.25e-01 | 100.0% | 44.4% |
| 4134156 | 2004.1.1.125 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RuvB_N | 0.69 | 62.0 | 4.84e-01 | 100.0% | 51.2% |
| None | — | 0.69 | 62.0 | 4.67e-01 | 100.0% | 45.6% | |
| None | — | 0.69 | 62.0 | 4.81e-01 | 100.0% | 51.2% | |
| 5068766 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.69 | 51.0 | 4.08e-01 | 100.0% | 39.4% |
| None | — | 0.68 | 61.0 | 4.68e-01 | 100.0% | 46.9% | |
| None | — | 0.68 | 61.0 | 4.56e-01 | 100.0% | 43.2% | |
| 4069782 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 61.0 | 4.18e-01 | 100.0% | 30.9% |
| 4318504 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.68 | 60.0 | 4.67e-01 | 100.0% | 57.6% |
| 4025422 | 2004.1.1.296 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM_bind | 0.68 | 59.0 | 4.19e-01 | 100.0% | 38.8% |
| 4431149 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.67 | 44.0 | 3.63e-01 | 98.7% | 37.0% |
| 5072054 | 2004.1.1.176 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Beta-Casp | 0.67 | 58.0 | 4.41e-01 | 100.0% | 87.4% |
| 4069364 | 2002.1.1.236 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHQS | 0.67 | 48.0 | 3.65e-01 | 100.0% | 32.2% |
| 4990761 | 247.1.1.53 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Beta-Casp | 0.66 | 58.0 | 3.54e-01 | 100.0% | 36.4% |
| 4985671 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 58.0 | 3.99e-01 | 100.0% | 29.3% |
| None | — | 0.66 | 57.0 | 4.48e-01 | 100.0% | 47.6% | |
| 3253623 | 2004.1.1.296 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM_bind | 0.65 | 57.0 | 4.23e-01 | 100.0% | 46.8% |
| 3816173 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.65 | 49.0 | 3.01e-01 | 100.0% | 13.8% |
| 4984062 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.65 | 53.0 | 4.23e-01 | 98.7% | 45.3% |
| 4542391 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 54.0 | 3.84e-01 | 100.0% | 29.2% |
| 4932834 | 2004.1.1.176 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Beta-Casp | 0.63 | 55.0 | 4.08e-01 | 100.0% | 80.5% |
| 4948046 | 2004.1.1.1203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RMMBL | 0.63 | 55.0 | 4.17e-01 | 100.0% | 87.9% |
| 3329754 | 2003.1.5.115 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29 | 0.62 | 49.0 | 3.70e-01 | 86.8% | 60.0% |
| 3272236 | 2004.1.1.176 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Beta-Casp | 0.62 | 52.0 | 3.95e-01 | 96.1% | 87.7% |
| 4890989 | 148.1.3.231 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_7 | 0.62 | 51.0 | 4.66e-01 | 90.8% | 73.3% |
| 4975660 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.62 | 53.0 | 3.29e-01 | 100.0% | 34.7% |
| 5051757 | 2004.1.1.176 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Beta-Casp | 0.60 | 51.0 | 3.99e-01 | 100.0% | 87.2% |
| 5005357 | 7542.1.2.3 ↗ | a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › AcnX_2nd | 0.59 | 43.0 | 4.12e-01 | 98.7% | 66.7% |
| 3472986 | 2004.1.1.296 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM_bind | 0.58 | 49.0 | 3.53e-01 | 97.4% | 40.0% |
| 3260169 | 2004.1.1.133 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHD3_GTPase | 0.58 | 50.0 | 3.37e-01 | 100.0% | 43.1% |
| 5076103 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.58 | 42.0 | 3.11e-01 | 100.0% | 26.5% |
| 4132035 | 2003.1.5.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr | 0.57 | 47.0 | 3.09e-01 | 98.7% | 42.5% |
| 4926930 | 2007.1.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase | 0.57 | 49.0 | 3.78e-01 | 100.0% | 68.6% |
| None | — | 0.57 | 50.0 | 3.36e-01 | 100.0% | 48.7% | |
| 5077825 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.57 | 49.0 | 3.97e-01 | 100.0% | 75.5% |
| 5048984 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.56 | 48.0 | 3.86e-01 | 100.0% | 47.1% |
| 5039656 | 2002.1.1.66 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I | 0.55 | 48.0 | 3.74e-01 | 100.0% | 54.1% |
| 4961995 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.55 | 47.0 | 3.11e-01 | 100.0% | 22.4% |
| 3265451 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.55 | 47.0 | 3.10e-01 | 100.0% | 37.0% |
| 4440590 | 7529.1.1.3 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N | 0.54 | 47.0 | 3.68e-01 | 100.0% | 84.6% |
| 3272042 | 2003.1.5.246 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12, KR | 0.53 | 43.0 | 2.59e-01 | 90.8% | 15.5% |
| 2171779 | 2003.1.1.64 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Staph_opine_DH | 0.53 | 45.0 | 3.67e-01 | 100.0% | 50.3% |
| 4625700 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.53 | 46.0 | 3.80e-01 | 100.0% | 57.2% |
| 3294524 | 2492.1.1.6 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › A_deamin | 0.53 | 44.0 | 2.90e-01 | 100.0% | 61.0% |
| 4042980 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.53 | 46.0 | 3.77e-01 | 100.0% | 56.6% |
| 4052441 | 2003.1.5.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr | 0.53 | 38.0 | 2.47e-01 | 77.6% | 37.9% |
| 4342185 | 7529.1.1.3 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N | 0.52 | 44.0 | 3.55e-01 | 100.0% | 83.5% |
| 4194158 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.52 | 45.0 | 3.76e-01 | 100.0% | 86.4% |
| 3190020 | 2003.1.1.36 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 3HCDH_N | 0.52 | 44.0 | 3.40e-01 | 98.7% | 39.5% |
| 4396205 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.52 | 45.0 | 3.76e-01 | 100.0% | 87.9% |
| 5009806 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 44.0 | 3.34e-01 | 100.0% | 41.0% |
| 4671589 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.52 | 45.0 | 3.77e-01 | 100.0% | 76.3% |
| 3212938 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.52 | 44.0 | 3.07e-01 | 100.0% | 43.2% |
| 4382760 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.51 | 45.0 | 3.44e-01 | 100.0% | 42.2% |
| 4487278 | 2002.1.1.66 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I | 0.51 | 43.0 | 3.23e-01 | 100.0% | 47.3% |
| 3893333 | 2004.1.1.495 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TRAPPC10_1st | 0.51 | 45.0 | 3.37e-01 | 100.0% | 44.6% |
| 260095 | 2007.1.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › ThuA | 0.51 | 44.0 | 3.13e-01 | 100.0% | 36.3% |
| 3398751 | 7541.1.1.1 ↗ | a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › MoCF_biosynth | 0.50 | 37.0 | 2.91e-01 | 80.3% | 98.9% |
| 3683253 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.50 | 43.0 | 2.93e-01 | 100.0% | 26.2% |