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NC_053172.1__YP_010001135.1__JZX77_gp69__00069

Bact-Vir

NC_053172.1__YP_010001135.1__JZX77_gp69__00069

Identity

Accession:
NC_053172 ↗
Kingdom:
phage

Quality

78.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ruthyvirus› Gordonia_phage_DumpsterDude

TaxID: 2713262

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-41_61-163
PDB
Domain cluster: rep: MH651167.1__AXQ62904.1__SEA_ANGELIQUE_73__00073__D11-40_57-158
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1e1dA02 1.20.1270.20 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.67 37.0 4.40e-01 100.0% 82.1%
2ot4A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.66 42.0 4.62e-01 100.0% 78.5%
3sf6A01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.66 33.0 3.39e-01 90.9% 48.1%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.65 31.0 3.42e-01 79.5% 54.4%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 33.0 3.77e-01 79.5% 66.0%
2kq9A00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.63 37.0 3.98e-01 76.5% 67.0%
2qe9B01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.60 55.0 5.19e-01 100.0% 91.1%
2rfqC03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.59 44.0 3.99e-01 100.0% 58.3%
2rldA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.57 38.0 4.05e-01 100.0% 78.9%
1ux5A03 1.20.58.2220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Formin, FH2 domain 0.55 36.0 3.04e-01 82.6% 36.8%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.54 30.0 3.20e-01 79.5% 59.8%
3ckdA02 1.20.58.360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines 0.54 32.0 3.31e-01 88.6% 60.5%
2ch7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.54 33.0 2.48e-01 79.5% 26.9%
2p0nA00 1.20.120.520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like 0.53 45.0 4.24e-01 93.9% 97.5%
1auwA02 1.20.200.10 Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) 0.53 41.0 3.48e-01 83.3% 74.1%
3o7pA01 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.52 39.0 3.35e-01 79.5% 90.8%
5fb0A02 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.52 39.0 4.18e-01 87.9% 93.8%
2bl2A00 1.20.120.610 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase 0.52 37.0 3.49e-01 97.7% 61.5%
3dyjA01 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.51 39.0 3.65e-01 80.3% 75.3%
3mwfA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.51 37.0 3.27e-01 75.0% 98.9%
4iu9B02 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.50 37.0 3.21e-01 75.8% 65.0%
1t98A02 1.20.58.590 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain 0.50 34.0 3.23e-01 70.5% 67.5%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3944785 192.29.1.183 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF28674 0.79 41.0 4.00e-01 77.3% 46.2%
5012928 4044.1.1.0 ↗ alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins 0.70 49.0 5.48e-01 100.0% 95.0%
4005523 3860.1.1.167 ↗ alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › MscS_porin 0.65 32.0 3.02e-01 76.5% 39.4%
137172 192.10.1.2 ↗ alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain › DksA-like_N 0.64 37.0 4.47e-01 74.2% 92.5%
4887185 4970.1.1.0 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.59 38.0 4.26e-01 79.5% 82.1%
3225373 601.1.1.6 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › TLN1-like_RS 0.58 44.0 4.07e-01 99.2% 62.4%
3735768 5001.1.1.87 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › EXS 0.58 44.0 3.11e-01 100.0% 25.9%
3236002 5054.1.1.59 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 0.58 46.0 3.54e-01 82.6% 40.4%
4956930 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.56 37.0 3.00e-01 79.5% 36.7%
3607893 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.55 35.0 3.44e-01 79.5% 59.3%
3711596 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.55 35.0 3.28e-01 79.5% 53.8%
3388735 5050.1.1.11 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › UNC-93 0.55 37.0 3.11e-01 100.0% 39.1%
4341653 5052.1.1.1 ↗ alpha complex topology › Proton glutamate symport protein › Proton glutamate symport protein › Proton glutamate symport protein › SDF 0.55 47.0 3.39e-01 95.5% 83.3%
3176206 3615.1.1.0 ↗ alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain 0.54 40.0 3.09e-01 75.8% 100.0%
4008904 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.54 34.0 2.52e-01 79.5% 26.7%
3598164 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.54 35.0 3.62e-01 79.5% 68.8%
3221903 5051.1.1.0 ↗ alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like 0.54 49.0 3.43e-01 100.0% 78.2%
3663497 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.54 36.0 3.38e-01 79.5% 58.1%
3747865 5050.1.1.6 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › OATP 0.53 41.0 3.14e-01 79.5% 78.3%
3823532 192.29.1.19 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Cornichon 0.52 40.0 3.91e-01 80.3% 82.1%
3534773 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.52 41.0 3.50e-01 83.3% 65.1%
4946068 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.52 40.0 3.38e-01 82.6% 66.1%
5044061 3883.1.1.1 ↗ alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf 0.51 40.0 3.63e-01 82.6% 74.4%
5052059 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.51 39.0 3.39e-01 81.1% 70.0%
5063533 3615.1.1.0 ↗ alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain 0.51 39.0 3.55e-01 79.5% 95.3%
3973779 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.51 39.0 3.45e-01 82.6% 62.5%
3969345 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.50 37.0 3.16e-01 77.3% 87.3%
D2 medium residues 215-275
PDB
Domain cluster: rep: MG941013.1__AVJ50990.1__XHP1_00053__00053__D202-260
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.72 59.0 5.63e-01 100.0% 77.8%
2ly1A01 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.70 55.0 5.05e-01 88.5% 65.8%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 55.0 5.13e-01 86.9% 69.3%
3me5A01 1.10.260.140 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › 0.70 41.0 4.04e-01 98.4% 54.7%
4r24B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.68 59.0 5.34e-01 100.0% 70.6%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.67 49.0 3.82e-01 95.1% 35.9%
3nbiA01 1.10.8.1020 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain 0.66 54.0 5.54e-01 96.7% 94.8%
2od5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 4.55e-01 86.9% 64.8%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 48.0 4.74e-01 86.9% 76.6%
2fi1A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.65 41.0 4.10e-01 95.1% 60.9%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 48.0 4.43e-01 82.0% 59.5%
1ucrB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 45.0 4.24e-01 86.9% 62.7%
6czfA01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.63 43.0 2.73e-01 72.1% 65.7%
2l4mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 42.0 4.05e-01 82.0% 63.8%
1i7dA04 1.10.290.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 0.61 52.0 4.19e-01 98.4% 89.0%
1t6sB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 48.0 4.50e-01 98.4% 70.1%
1tuzA00 1.10.238.110 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Diacylglycerol kinase alpha. 0.60 51.0 4.22e-01 100.0% 51.7%
6az1a00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 4.02e-01 86.9% 63.9%
1u5tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 42.0 4.08e-01 86.9% 66.2%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 50.0 4.41e-01 98.4% 72.8%
3gz5B02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 4.70e-01 100.0% 83.8%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 48.0 4.34e-01 96.7% 72.2%
4lhfA00 6.10.200.10 Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox 0.56 47.0 4.41e-01 98.4% 74.7%
2pyqA00 1.10.238.120 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Jann4075-like 0.56 49.0 4.05e-01 100.0% 55.3%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 4.20e-01 100.0% 70.7%
2fsjA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 39.0 3.08e-01 75.4% 60.1%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 40.0 3.73e-01 86.9% 61.3%
4ig1A00 3.10.520.10 Alpha Beta › Roll › T-fold › ApbE-like domains 0.55 41.0 2.72e-01 88.5% 48.8%
6n9gA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 41.0 3.58e-01 86.9% 71.0%
2wteA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.97e-01 98.4% 75.0%
2jtvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 38.0 3.75e-01 100.0% 72.3%
4pg4A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 47.0 3.45e-01 100.0% 62.7%
3dgpB00 3.30.70.1220 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TFB5-like 0.53 41.0 4.13e-01 100.0% 85.7%
1dw0A00 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.52 42.0 3.56e-01 93.4% 88.4%
4gx0A01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 41.0 3.42e-01 85.2% 52.4%
4c23B02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 43.0 2.99e-01 95.1% 29.9%
3pfyA02 6.10.20.180 Special › Helix non-globular › Arc Repressor Mutant, subunit A › 0.52 40.0 4.11e-01 93.4% 96.5%
2vqcA00 1.10.10.1470 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like 0.52 37.0 3.66e-01 86.9% 71.4%
4c98A02 3.30.70.1900 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 43.0 3.45e-01 100.0% 90.5%
6vddA02 1.20.1060.10 Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 0.51 35.0 2.96e-01 73.8% 56.5%
5tk8A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.51 40.0 2.96e-01 91.8% 89.5%
5i0hA02 1.20.5.4820 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.50 40.0 3.93e-01 96.7% 87.5%
2uv8A04 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 40.0 2.44e-01 98.4% 25.8%
2fwrA01 3.40.1170.30 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › 0.50 32.0 3.31e-01 100.0% 68.4%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3604634 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.89 78.0 7.86e-01 100.0% 95.0%
3291502 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.73 63.0 6.40e-01 96.7% 98.3%
3177441 101.1.2.53 ↗ alpha arrays › HTH › HTH › winged helix domain › Mnd1 0.72 56.0 4.21e-01 86.9% 34.7%
4941699 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 56.0 5.28e-01 86.9% 69.3%
5021354 101.1.2.619 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_33 0.72 48.0 4.70e-01 72.1% 64.6%
3958566 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.71 56.0 4.91e-01 86.9% 57.8%
3617966 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 52.0 4.99e-01 86.9% 70.0%
4994794 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 55.0 5.17e-01 86.9% 76.0%
5032570 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 53.0 4.63e-01 86.9% 53.7%
4967858 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 53.0 5.00e-01 86.9% 68.0%
3723515 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.69 52.0 5.11e-01 96.7% 76.9%
5071693 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 48.0 4.57e-01 86.9% 61.3%
3786852 101.1.2.4 ↗ alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.68 54.0 4.86e-01 86.9% 65.9%
3518858 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 54.0 4.94e-01 86.9% 68.8%
4229465 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 54.0 4.95e-01 86.9% 66.3%
4979200 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 50.0 5.38e-01 86.9% 96.0%
3613364 108.1.1.27 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6 0.67 60.0 5.01e-01 100.0% 89.5%
4026717 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 52.0 5.05e-01 86.9% 75.7%
5036590 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 50.0 4.14e-01 85.2% 43.5%
5021801 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 53.0 4.96e-01 86.9% 72.0%
4985370 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 51.0 4.52e-01 83.6% 56.7%
3632862 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 50.0 4.12e-01 80.3% 74.5%
5031078 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 55.0 4.65e-01 91.8% 59.0%
4979487 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 50.0 3.81e-01 82.0% 38.6%
5071343 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 56.0 4.88e-01 98.4% 62.1%
3348879 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 47.0 5.10e-01 85.2% 94.0%
4927156 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 58.0 4.92e-01 100.0% 61.0%
5000704 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 51.0 4.51e-01 86.9% 64.4%
4986316 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 47.0 4.53e-01 82.0% 68.0%
4934021 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 49.0 3.98e-01 83.6% 45.0%
5041057 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 47.0 4.19e-01 86.9% 52.6%
5031076 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 53.0 4.30e-01 91.8% 54.8%
5035624 101.1.2.54 ↗ alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.64 48.0 4.40e-01 83.6% 65.9%
4943320 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 50.0 4.06e-01 86.9% 49.2%
3282970 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 47.0 4.70e-01 82.0% 87.7%
3614506 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.64 54.0 4.81e-01 100.0% 65.6%
4928394 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 50.0 4.90e-01 86.9% 81.8%
5028427 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 56.0 4.68e-01 100.0% 62.9%
4943641 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 47.0 4.51e-01 86.9% 68.0%
2632459 108.1.1.20 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_like 0.63 54.0 5.15e-01 100.0% 80.8%
4965088 101.1.2.909 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF5797 0.63 56.0 5.03e-01 100.0% 72.9%
4984847 101.1.2.128 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF2582 0.63 47.0 4.64e-01 82.0% 78.5%
5051554 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 48.0 4.48e-01 85.2% 68.8%
3878277 108.1.1.20 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_like 0.63 55.0 4.81e-01 100.0% 80.0%
5023957 101.1.2.280 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.63 55.0 5.04e-01 98.4% 81.2%
3857352 592.1.1.8 ↗ alpha arrays › PWI domain-like › PWI domain › PWI domain › TRI4_N 0.62 43.0 4.07e-01 96.7% 60.0%
4990701 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 54.0 4.27e-01 100.0% 57.7%
4999528 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 50.0 4.54e-01 91.8% 69.4%
4997662 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 53.0 4.41e-01 98.4% 58.2%
5074949 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 50.0 4.45e-01 91.8% 65.6%
3593963 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.61 52.0 4.79e-01 98.4% 75.0%
4947811 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 47.0 3.89e-01 86.9% 47.0%
4964386 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 48.0 4.26e-01 91.8% 62.1%
4125762 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.60 52.0 4.15e-01 100.0% 52.3%
3972430 101.1.2.213 ↗ alpha arrays › HTH › HTH › winged helix domain › NrtR_WHD 0.60 50.0 4.77e-01 100.0% 90.7%
5010522 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 42.0 3.83e-01 86.9% 53.9%
3537242 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.58 44.0 3.86e-01 86.9% 61.0%
5073781 219.1.1.153 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › BtrH_N 0.57 49.0 3.42e-01 95.1% 32.8%
4974454 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.56 48.0 3.25e-01 96.7% 27.2%
4454943 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.56 43.0 3.84e-01 82.0% 88.2%
4968041 101.1.2.26 ↗ alpha arrays › HTH › HTH › winged helix domain › HxlR 0.56 47.0 3.68e-01 100.0% 82.8%
3989662 101.1.2.54 ↗ alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.56 46.0 3.77e-01 98.4% 48.0%
4970407 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.56 48.0 3.71e-01 100.0% 71.0%
5075009 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 45.0 4.03e-01 96.7% 65.3%
3967843 101.1.9.44 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › PyocinActivator 0.55 45.0 4.33e-01 100.0% 84.0%
4951142 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 45.0 3.64e-01 100.0% 45.4%
3930245 101.1.2.407 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.54 42.0 3.62e-01 91.8% 59.1%
4673147 2484.1.1.65 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Maelstrom 0.54 45.0 3.08e-01 96.7% 85.1%
3963517 101.1.9.44 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › PyocinActivator 0.53 44.0 4.16e-01 100.0% 77.5%
3782381 101.1.2.407 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.53 44.0 3.64e-01 100.0% 68.0%
3701129 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.53 43.0 3.95e-01 91.8% 73.5%
4129764 101.1.2.280 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.53 43.0 4.00e-01 100.0% 72.5%
5070584 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.53 44.0 3.96e-01 100.0% 72.2%
5013282 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 41.0 3.42e-01 93.4% 56.7%
5035935 219.1.1.26 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Phytochelatin 0.51 41.0 3.06e-01 96.7% 33.0%
3393003 6039.1.1.0 ↗ few secondary structure elements › CLIP domain › CLIP domain › CLIP domain 0.50 38.0 3.99e-01 85.2% 94.5%