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NC_053243.1__YP_010002379.1__J1770_gp73__00073
Bact-VirNC_053243.1__YP_010002379.1__J1770_gp73__00073
Identity
- Accession:
- NC_053243 ↗
- Kingdom:
- phage
Quality
68.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Stackebrandtviridae›
Leonardvirus›
Gordonia_phage_EMoore
TaxID: 2656534
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 12-66
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xqnT01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.66 | 53.0 | 5.24e-01 | 98.2% | 98.4% |
| 2corA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.66 | 53.0 | 4.78e-01 | 92.7% | 73.4% |
| 1y8fA00 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.62 | 42.0 | 4.38e-01 | 70.9% | 82.4% |
| 4jcjB01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.62 | 51.0 | 4.90e-01 | 98.2% | 95.4% |
| 2dloA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.61 | 50.0 | 4.54e-01 | 100.0% | 80.2% |
| 2miuA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.59 | 50.0 | 4.25e-01 | 100.0% | 63.3% |
| 1z2qA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 42.0 | 3.73e-01 | 80.0% | 60.7% |
| 4bbqA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 43.0 | 4.02e-01 | 81.8% | 87.1% |
| 2d8yA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.57 | 45.0 | 4.28e-01 | 96.4% | 84.7% |
| 2xjyA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.56 | 45.0 | 4.41e-01 | 98.2% | 98.4% |
| 3purA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 42.0 | 3.86e-01 | 96.4% | 62.2% |
| 4ccgY00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 41.0 | 3.89e-01 | 81.8% | 92.5% |
| 2iybE00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.54 | 42.0 | 4.11e-01 | 96.4% | 100.0% |
| 2vp7A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 45.0 | 4.28e-01 | 94.5% | 97.0% |
| 1v6gA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.53 | 42.0 | 3.85e-01 | 96.4% | 72.8% |
| 2m3lA00 | 3.30.240.40 | Alpha Beta › 2-Layer Sandwich › CRO Repressor › E6 early regulatory protein | 0.52 | 39.0 | 3.58e-01 | 85.5% | 73.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.65 | 51.0 | 4.06e-01 | 94.5% | 45.4% | |
| 3889954 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.64 | 44.0 | 4.58e-01 | 81.8% | 80.0% |
| 3333897 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.62 | 46.0 | 4.06e-01 | 80.0% | 66.3% |
| 3395115 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.61 | 49.0 | 4.88e-01 | 98.2% | 100.0% |
| 3393209 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.61 | 41.0 | 4.38e-01 | 72.7% | 84.4% |
| 5069949 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.60 | 38.0 | 3.94e-01 | 85.5% | 70.0% |
| 5010496 | 377.9.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like | 0.58 | 37.0 | 3.90e-01 | 72.7% | 77.8% |
| 3715785 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.57 | 42.0 | 3.76e-01 | 80.0% | 70.9% |
| 3473689 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.56 | 40.0 | 3.86e-01 | 78.2% | 70.8% |
| 4999356 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.55 | 48.0 | 4.46e-01 | 98.2% | 94.3% |
| 3503755 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.55 | 42.0 | 4.12e-01 | 83.6% | 96.6% |
| 3597635 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 44.0 | 3.60e-01 | 92.7% | 72.4% |
| 3921863 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.52 | 40.0 | 3.80e-01 | 92.7% | 70.0% |