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NC_053247.1__YP_010002663.1__J1774_gp05__00005

Bact-Vir

NC_053247.1__YP_010002663.1__J1774_gp05__00005

Identity

Accession:
NC_053247 ↗
Kingdom:
phage

Quality

56.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 140-222
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.72 52.0 4.88e-01 75.9% 61.8%
1vh6A01 6.10.140.1940 Special › Helix non-globular › Helix Hairpins › 0.72 43.0 4.11e-01 84.3% 51.5%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.68 48.0 4.49e-01 73.5% 64.1%
3sjqC00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 47.0 4.84e-01 81.9% 82.5%
3ehfB01 6.10.250.2870 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.62 43.0 4.00e-01 71.1% 59.6%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4652719 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.59 46.0 4.44e-01 84.3% 74.7%
D2 medium residues 1-52
PDB