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NC_053249.1__YP_010002839.1__J1776_gp01__00001
Bact-VirNC_053249.1__YP_010002839.1__J1776_gp01__00001
Identity
- Accession:
- NC_053249 ↗
- Kingdom:
- phage
Quality
87.5
mean pLDDT
Taxonomy
TaxID: 2591211
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-60
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ug2A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.83 | 63.0 | 6.68e-01 | 80.0% | 100.0% |
| 2llkA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.83 | 55.0 | 6.48e-01 | 71.7% | 100.0% |
| 1j1vA00 | 1.10.1750.10 | Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain | 0.83 | 66.0 | 5.67e-01 | 86.7% | 56.4% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.79 | 57.0 | 5.92e-01 | 85.0% | 82.1% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 58.0 | 5.33e-01 | 80.0% | 61.8% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 62.0 | 6.13e-01 | 88.3% | 82.5% |
| 2hqvA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.77 | 54.0 | 3.83e-01 | 80.0% | 25.6% |
| 1jhfA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 54.0 | 5.19e-01 | 75.0% | 73.9% |
| 3frwB00 | 1.10.1270.10 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like | 0.76 | 61.0 | 5.11e-01 | 91.7% | 53.1% |
| 4izzB02 | 1.10.10.1680 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain | 0.75 | 63.0 | 6.11e-01 | 95.0% | 83.8% |
| 1ignB02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.74 | 56.0 | 4.87e-01 | 81.7% | 58.7% |
| 4b6xA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 46.0 | 4.41e-01 | 70.0% | 56.5% |
| 4mloA03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.73 | 54.0 | 5.45e-01 | 83.3% | 80.3% |
| 2q0oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 61.0 | 5.86e-01 | 90.0% | 86.6% |
| 1l3lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 54.0 | 5.34e-01 | 80.0% | 85.7% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 58.0 | 6.04e-01 | 86.7% | 96.4% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 61.0 | 5.63e-01 | 95.0% | 78.2% |
| 4cgrB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.72 | 62.0 | 4.35e-01 | 96.7% | 36.1% |
| 2v9kA01 | 1.10.10.2050 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.69 | 48.0 | 5.16e-01 | 71.7% | 100.0% |
| 2cobA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 47.0 | 5.15e-01 | 76.7% | 97.7% |
| 1h72C02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.68 | 49.0 | 3.71e-01 | 75.0% | 51.1% |
| 5svlA01 | 1.10.287.940 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel | 0.68 | 44.0 | 4.23e-01 | 71.7% | 58.8% |
| 2m8gX00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 51.0 | 4.88e-01 | 83.3% | 70.0% |
| 1xc5A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 49.0 | 5.24e-01 | 78.3% | 97.9% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.67 | 47.0 | 4.42e-01 | 83.3% | 59.2% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 51.0 | 4.82e-01 | 85.0% | 87.5% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 55.0 | 5.35e-01 | 98.3% | 89.4% |
| 1rz4A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 47.0 | 4.18e-01 | 81.7% | 54.3% |
| 3o60A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.64 | 57.0 | 4.00e-01 | 98.3% | 51.6% |
| 1x0tA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.63 | 49.0 | 4.91e-01 | 83.3% | 93.4% |
| 3b0pA02 | 1.20.120.1460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.62 | 46.0 | 4.31e-01 | 81.7% | 82.7% |
| 1d8jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 47.0 | 4.30e-01 | 90.0% | 97.5% |
| 1v8bA01 | 3.40.50.1480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Adenosylhomocysteinase-like | 0.58 | 48.0 | 3.09e-01 | 95.0% | 43.2% |
| 5cofA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.57 | 47.0 | 3.48e-01 | 95.0% | 67.4% |
| 1td6A03 | 1.10.472.40 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Hypothetical protein mg237 homolog; domain 3 | 0.57 | 40.0 | 3.49e-01 | 98.3% | 47.8% |
| 2kpjA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.57 | 38.0 | 3.71e-01 | 76.7% | 61.4% |
| 3rbtA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 46.0 | 3.78e-01 | 93.3% | 97.4% |
| 3cuqB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 48.0 | 4.64e-01 | 96.7% | 97.1% |
| 3hklA00 | 1.10.2000.10 | Mainly Alpha › Orthogonal Bundle › Frizzled cysteine-rich domain › Frizzled cysteine-rich domain | 0.56 | 43.0 | 3.32e-01 | 85.0% | 52.5% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 44.0 | 4.03e-01 | 93.3% | 65.4% |
| 2oocB00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.55 | 44.0 | 3.80e-01 | 95.0% | 80.0% |
| 1cf7A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 39.0 | 3.88e-01 | 81.7% | 71.6% |
| 2b4lA02 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.54 | 40.0 | 2.99e-01 | 81.7% | 68.8% |
| 2ig3A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 47.0 | 3.73e-01 | 100.0% | 50.4% |
| 2y75A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 43.0 | 3.49e-01 | 95.0% | 60.0% |
ECOD (84)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4559046 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.89 | 73.0 | 5.97e-01 | 88.3% | 51.4% |
| 5002577 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.88 | 81.0 | 6.33e-01 | 100.0% | 50.8% |
| 3781517 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 66.0 | 6.96e-01 | 85.0% | 85.5% |
| 3724374 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.88 | 72.0 | 6.61e-01 | 88.3% | 69.3% |
| 3727715 | 101.1.2.384 ↗ | alpha arrays › HTH › HTH › winged helix domain › Myb_DNA-bind_8 | 0.87 | 62.0 | 6.79e-01 | 75.0% | 100.0% |
| 3385990 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.87 | 71.0 | 5.80e-01 | 88.3% | 51.4% |
| 4606105 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.86 | 72.0 | 6.00e-01 | 90.0% | 55.0% |
| 4319964 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.86 | 64.0 | 6.66e-01 | 78.3% | 87.3% |
| 4601417 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.86 | 71.0 | 5.99e-01 | 88.3% | 56.8% |
| 4524648 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.86 | 71.0 | 5.78e-01 | 88.3% | 51.4% |
| 3969487 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 58.0 | 6.29e-01 | 70.0% | 87.8% |
| 3281912 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 58.0 | 6.05e-01 | 73.3% | 76.4% |
| 2167675 | 101.1.1.41 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GcrA | 0.86 | 60.0 | 6.63e-01 | 76.7% | 89.8% |
| 4125972 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.84 | 69.0 | 5.74e-01 | 88.3% | 54.0% |
| 3632013 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 62.0 | 6.73e-01 | 81.7% | 94.0% |
| 4212645 | 101.1.6.31 ↗ | alpha arrays › HTH › HTH › TrpR › Phage_integrase | 0.84 | 54.0 | 6.32e-01 | 71.7% | 100.0% |
| 4051624 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.84 | 68.0 | 5.58e-01 | 88.3% | 51.4% |
| 4618625 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 68.0 | 5.51e-01 | 86.7% | 49.5% |
| 5077769 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.83 | 63.0 | 6.85e-01 | 85.0% | 96.0% |
| 4197050 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.83 | 69.0 | 5.66e-01 | 91.7% | 51.4% |
| 4270831 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.83 | 68.0 | 5.57e-01 | 88.3% | 51.4% |
| 3686752 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 59.0 | 6.42e-01 | 75.0% | 96.0% |
| 4102935 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.82 | 67.0 | 5.51e-01 | 88.3% | 51.4% |
| 4591310 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.82 | 62.0 | 5.92e-01 | 81.7% | 84.3% |
| 3283500 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.82 | 63.0 | 6.78e-01 | 85.0% | 98.0% |
| 3956897 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.82 | 62.0 | 5.13e-01 | 81.7% | 51.4% |
| 3201282 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.82 | 64.0 | 6.25e-01 | 88.3% | 76.9% |
| 3974068 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.81 | 63.0 | 6.02e-01 | 83.3% | 72.5% |
| 4346134 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.81 | 66.0 | 5.46e-01 | 88.3% | 51.9% |
| 4194508 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 54.0 | 5.61e-01 | 73.3% | 74.5% |
| 4019885 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.80 | 58.0 | 6.01e-01 | 75.0% | 81.8% |
| 4974178 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.80 | 60.0 | 5.02e-01 | 80.0% | 52.0% |
| 3969859 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.80 | 60.0 | 6.06e-01 | 81.7% | 83.3% |
| 3968456 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.80 | 61.0 | 5.02e-01 | 83.3% | 54.6% |
| 3943189 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.80 | 58.0 | 6.08e-01 | 78.3% | 85.5% |
| 4031830 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.79 | 53.0 | 5.70e-01 | 70.0% | 84.0% |
| 4034069 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.79 | 53.0 | 5.57e-01 | 73.3% | 76.4% |
| 3442013 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.79 | 67.0 | 5.65e-01 | 91.7% | 61.1% |
| 3973662 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 62.0 | 5.24e-01 | 86.7% | 63.0% |
| 5053505 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.78 | 59.0 | 6.32e-01 | 88.3% | 96.0% |
| 3602804 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 52.0 | 5.68e-01 | 73.3% | 84.0% |
| 4067934 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.78 | 64.0 | 5.61e-01 | 91.7% | 71.1% |
| 4608916 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.77 | 52.0 | 5.40e-01 | 73.3% | 76.4% |
| 4281782 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.77 | 52.0 | 4.82e-01 | 73.3% | 56.0% |
| 3957642 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.77 | 54.0 | 5.61e-01 | 78.3% | 80.0% |
| 4927335 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.77 | 57.0 | 4.23e-01 | 80.0% | 72.0% |
| 4550738 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.76 | 56.0 | 5.46e-01 | 78.3% | 92.3% |
| 3588286 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.76 | 54.0 | 5.82e-01 | 76.7% | 94.0% |
| 4643518 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.76 | 56.0 | 5.80e-01 | 85.0% | 87.3% |
| 3598541 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 62.0 | 5.62e-01 | 90.0% | 68.8% |
| 4583223 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.75 | 56.0 | 5.80e-01 | 85.0% | 87.3% |
| 3197445 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 60.0 | 6.21e-01 | 91.7% | 94.5% |
| 4210926 | 101.1.2.27 ↗ | alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind | 0.75 | 56.0 | 5.01e-01 | 80.0% | 63.5% |
| 4071647 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.75 | 50.0 | 5.19e-01 | 73.3% | 74.5% |
| 3247642 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.75 | 55.0 | 4.98e-01 | 78.3% | 59.0% |
| 3723795 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.75 | 53.0 | 5.50e-01 | 75.0% | 98.2% |
| 4970998 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.74 | 66.0 | 5.53e-01 | 98.3% | 62.0% |
| 4495785 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.74 | 53.0 | 5.52e-01 | 83.3% | 83.6% |
| 4927758 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 56.0 | 5.38e-01 | 85.0% | 71.4% |
| 3164420 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.74 | 56.0 | 5.86e-01 | 85.0% | 90.9% |
| 2417767 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.74 | 49.0 | 4.95e-01 | 73.3% | 69.5% |
| 4928175 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.74 | 49.0 | 5.49e-01 | 71.7% | 100.0% |
| 3404418 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.73 | 57.0 | 5.44e-01 | 85.0% | 74.3% |
| 4968085 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 54.0 | 5.25e-01 | 78.3% | 72.3% |
| 3243706 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.73 | 53.0 | 5.05e-01 | 78.3% | 66.7% |
| 4044443 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.73 | 51.0 | 5.27e-01 | 75.0% | 80.0% |
| 3943148 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.73 | 53.0 | 5.65e-01 | 80.0% | 98.0% |
| 4339388 | 101.1.2.27 ↗ | alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind | 0.73 | 52.0 | 5.11e-01 | 76.7% | 76.9% |
| 4938759 | 101.1.8.14 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › UPF0175 | 0.72 | 53.0 | 5.46e-01 | 81.7% | 87.3% |
| 4055190 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 51.0 | 5.15e-01 | 75.0% | 76.7% |
| 3285524 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.72 | 52.0 | 3.93e-01 | 76.7% | 61.5% |
| 3515936 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.71 | 52.0 | 5.27e-01 | 80.0% | 80.0% |
| 4963346 | 101.1.2.928 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Cmi2_C | 0.71 | 50.0 | 5.14e-01 | 80.0% | 81.8% |
| 5028009 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 46.0 | 5.20e-01 | 75.0% | 100.0% |
| 5080838 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.70 | 54.0 | 5.42e-01 | 90.0% | 83.3% |
| 4316691 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 53.0 | 5.32e-01 | 80.0% | 98.3% |
| 5021717 | 101.1.1.562 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF28505 | 0.68 | 51.0 | 3.96e-01 | 80.0% | 38.5% |
| 3494091 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 55.0 | 4.76e-01 | 91.7% | 82.1% |
| 3603105 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 52.0 | 4.87e-01 | 86.7% | 70.7% |
| 4952257 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.65 | 54.0 | 4.37e-01 | 88.3% | 83.7% |
| 3556888 | 109.4.1.27 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › W2 | 0.61 | 50.0 | 3.67e-01 | 95.0% | 37.1% |
| 5075830 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 43.0 | 3.69e-01 | 81.7% | 43.6% |
| 4129105 | 101.1.1.99 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF4096 | 0.57 | 47.0 | 4.23e-01 | 96.7% | 68.9% |
| 5008490 | 159.1.1.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG | 0.52 | 47.0 | 4.13e-01 | 100.0% | 69.3% |
D2
medium
residues 61-115
Domain cluster:
representative
CATH (69)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oh3A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.90 | 79.0 | 5.64e-01 | 94.5% | 36.1% |
| 6humG01 | 1.20.120.1200 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ | 0.90 | 83.0 | 5.75e-01 | 100.0% | 80.6% |
| 3fseB02 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.89 | 77.0 | 5.55e-01 | 94.5% | 36.1% |
| 2qqyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.88 | 76.0 | 5.56e-01 | 94.5% | 39.9% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.88 | 76.0 | 6.86e-01 | 94.5% | 71.2% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.88 | 77.0 | 6.34e-01 | 94.5% | 57.6% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.87 | 74.0 | 7.32e-01 | 92.7% | 91.4% |
| 8befJ01 | 1.20.120.1200 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ | 0.87 | 71.0 | 4.89e-01 | 87.3% | 80.0% |
| 8e9gJ01 | 1.20.120.1200 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ | 0.87 | 76.0 | 5.25e-01 | 94.5% | 77.2% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.87 | 74.0 | 5.50e-01 | 94.5% | 38.8% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.86 | 76.0 | 6.96e-01 | 96.4% | 88.7% |
| 4b6xA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.86 | 74.0 | 6.88e-01 | 94.5% | 79.7% |
| 4fvmA06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.86 | 70.0 | 7.42e-01 | 87.3% | 100.0% |
| 3q1pA01 | 6.10.250.1120 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.85 | 58.0 | 6.65e-01 | 72.7% | 100.0% |
| 4mtxD00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.85 | 73.0 | 6.02e-01 | 94.5% | 54.7% |
| 2r9iA00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.85 | 71.0 | 6.55e-01 | 92.7% | 71.8% |
| 1fioA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.85 | 74.0 | 4.99e-01 | 96.4% | 85.8% |
| 1k04A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.85 | 72.0 | 5.80e-01 | 94.5% | 50.0% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.85 | 72.0 | 4.93e-01 | 94.5% | 72.7% |
| 2ib0A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.84 | 71.0 | 5.32e-01 | 94.5% | 38.5% |
| 2jdiG01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.84 | 67.0 | 6.48e-01 | 85.5% | 80.3% |
| 7cj3A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.84 | 72.0 | 4.57e-01 | 94.5% | 20.5% |
| 4a17U01 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.83 | 67.0 | 5.97e-01 | 94.5% | 62.3% |
| 4gltA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.83 | 73.0 | 5.71e-01 | 98.2% | 86.8% |
| 5ux1D00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.83 | 70.0 | 4.74e-01 | 94.5% | 26.9% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.83 | 70.0 | 5.73e-01 | 96.4% | 52.6% |
| 6yz2A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.83 | 73.0 | 5.59e-01 | 98.2% | 66.7% |
| 1o5hA00 | 1.20.120.680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle | 0.82 | 70.0 | 4.70e-01 | 94.5% | 26.0% |
| 3vkgB03 | 1.20.58.1120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 | 0.82 | 73.0 | 5.16e-01 | 98.2% | 70.5% |
| 5z7qA00 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.82 | 73.0 | 5.06e-01 | 100.0% | 38.1% |
| 6k6iA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.81 | 73.0 | 4.78e-01 | 100.0% | 33.3% |
| 3m7gA02 | 1.10.8.1010 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.81 | 68.0 | 5.67e-01 | 94.5% | 54.7% |
| 3pjaJ01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.81 | 72.0 | 5.35e-01 | 98.2% | 84.0% |
| 1bbhA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.80 | 72.0 | 5.35e-01 | 98.2% | 65.6% |
| 2qf9A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.80 | 68.0 | 4.86e-01 | 94.5% | 34.0% |
| 2e5yA02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.80 | 59.0 | 6.38e-01 | 80.0% | 97.8% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.80 | 68.0 | 5.43e-01 | 94.5% | 48.1% |
| 6srbA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.80 | 69.0 | 5.52e-01 | 98.2% | 84.4% |
| 7eu3E01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.79 | 67.0 | 5.78e-01 | 94.5% | 66.7% |
| 5ffdA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.79 | 67.0 | 5.00e-01 | 94.5% | 38.7% |
| 4etrB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.79 | 69.0 | 5.34e-01 | 100.0% | 45.9% |
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.78 | 65.0 | 5.89e-01 | 96.4% | 68.0% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.78 | 67.0 | 5.80e-01 | 96.4% | 67.1% |
| 1wfdA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.78 | 62.0 | 5.26e-01 | 89.1% | 52.7% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 66.0 | 5.53e-01 | 100.0% | 61.2% |
| 1m5iA00 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.76 | 64.0 | 5.24e-01 | 96.4% | 53.3% |
| 5cy5B00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.76 | 64.0 | 4.64e-01 | 94.5% | 36.2% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.76 | 63.0 | 5.96e-01 | 94.5% | 94.0% |
| 3rkoG00 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.75 | 66.0 | 5.44e-01 | 100.0% | 57.0% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.75 | 65.0 | 5.47e-01 | 94.5% | 57.8% |
| 3m1cB01 | 3.30.390.170 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.75 | 63.0 | 4.91e-01 | 89.1% | 78.9% |
| 5b1aC01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 59.0 | 5.57e-01 | 92.7% | 72.1% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.73 | 62.0 | 5.08e-01 | 98.2% | 84.9% |
| 3r6nA02 | 1.20.58.1060 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 64.0 | 4.65e-01 | 100.0% | 71.0% |
| 1qguB04 | 1.20.89.10 | Mainly Alpha › Up-down Bundle › Nitrogenase Molybdenum-iron Protein, subunit B; domain 4 › Nitrogenase Molybdenum-iron Protein, subunit B, domain 4 | 0.73 | 48.0 | 4.23e-01 | 76.4% | 45.8% |
| 3pltA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.71 | 59.0 | 3.97e-01 | 94.5% | 24.3% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 57.0 | 5.02e-01 | 94.5% | 60.2% |
| 2wzkA01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.69 | 57.0 | 4.29e-01 | 89.1% | 59.8% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 58.0 | 5.27e-01 | 96.4% | 69.7% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.69 | 56.0 | 5.12e-01 | 90.9% | 68.9% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.68 | 57.0 | 5.25e-01 | 100.0% | 97.3% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 57.0 | 5.69e-01 | 100.0% | 98.3% |
| 3rm5B02 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.67 | 54.0 | 3.68e-01 | 94.5% | 23.7% |
| 2p7vA00 | 1.20.120.1370 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Regulator of RNA polymerase sigma(70) subunit, domain 4 | 0.67 | 55.0 | 4.18e-01 | 100.0% | 44.4% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 53.0 | 5.18e-01 | 94.5% | 83.9% |
| 1xfiA02 | 1.20.1700.10 | Mainly Alpha › Up-down Bundle › AF1104-like › AF1104-like | 0.66 | 55.0 | 4.71e-01 | 94.5% | 68.9% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 50.0 | 4.79e-01 | 96.4% | 95.8% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 56.0 | 4.64e-01 | 100.0% | 57.8% |
| 6hwjA01 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.61 | 48.0 | 3.21e-01 | 90.9% | 20.4% |
ECOD (88)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4964878 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.92 | 81.0 | 7.42e-01 | 94.5% | 74.3% |
| 3572303 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.90 | 79.0 | 5.78e-01 | 92.7% | 53.8% |
| 4393704 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.90 | 83.0 | 4.75e-01 | 100.0% | 65.6% |
| 4345287 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.90 | 79.0 | 6.34e-01 | 94.5% | 52.0% |
| 4384750 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.90 | 79.0 | 6.45e-01 | 94.5% | 69.5% |
| 3289740 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.90 | 79.0 | 7.66e-01 | 94.5% | 86.7% |
| 3884649 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.90 | 78.0 | 6.41e-01 | 94.5% | 69.5% |
| 3776400 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.90 | 79.0 | 6.85e-01 | 94.5% | 65.0% |
| 5048061 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.90 | 77.0 | 7.77e-01 | 92.7% | 92.7% |
| 3971969 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.89 | 78.0 | 5.71e-01 | 94.5% | 38.5% |
| 3570403 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.89 | 78.0 | 5.82e-01 | 94.5% | 41.6% |
| 3554931 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.89 | 77.0 | 7.76e-01 | 92.7% | 94.4% |
| 4422869 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.89 | 78.0 | 6.25e-01 | 94.5% | 52.0% |
| 3498716 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.89 | 79.0 | 6.14e-01 | 96.4% | 48.2% |
| 3484694 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.89 | 77.0 | 4.63e-01 | 94.5% | 15.8% |
| 4019969 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.89 | 78.0 | 4.74e-01 | 94.5% | 17.6% |
| 5048590 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.88 | 77.0 | 6.02e-01 | 94.5% | 47.3% |
| 3216585 | 3291.1.1.172 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › KIF21A | 0.88 | 77.0 | 5.54e-01 | 94.5% | 35.9% |
| 3619577 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.88 | 77.0 | 6.41e-01 | 94.5% | 73.3% |
| 3641389 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.88 | 77.0 | 4.48e-01 | 94.5% | 12.5% |
| 3614078 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.88 | 77.0 | 5.83e-01 | 94.5% | 43.3% |
| 3290879 | 3922.1.1.155 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DUF4349 | 0.88 | 76.0 | 7.02e-01 | 94.5% | 74.3% |
| 2814929 | 150.1.1.14 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › EncFtn-like | 0.88 | 76.0 | 7.08e-01 | 94.5% | 76.5% |
| 3744696 | 603.1.1.2 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Not3 | 0.88 | 78.0 | 6.16e-01 | 96.4% | 50.5% |
| 4646268 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.88 | 76.0 | 6.97e-01 | 94.5% | 80.0% |
| 4955780 | 3939.1.1.387 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › DUF4349 | 0.88 | 76.0 | 7.17e-01 | 94.5% | 80.0% |
| 4247116 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.87 | 76.0 | 5.95e-01 | 94.5% | 47.3% |
| 5073085 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.87 | 76.0 | 5.27e-01 | 94.5% | 31.7% |
| 3297770 | 622.4.1.26 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › HisKA | 0.87 | 76.0 | 6.48e-01 | 94.5% | 61.2% |
| 3672410 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.87 | 76.0 | 6.23e-01 | 94.5% | 54.7% |
| 4979981 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.87 | 75.0 | 5.91e-01 | 94.5% | 47.3% |
| 4223425 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.87 | 76.0 | 6.02e-01 | 94.5% | 49.5% |
| 3685099 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.87 | 76.0 | 7.13e-01 | 94.5% | 80.0% |
| 3805996 | 192.10.1.7 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain › HisKA | 0.87 | 75.0 | 6.75e-01 | 94.5% | 69.3% |
| 3304304 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.87 | 75.0 | 6.00e-01 | 94.5% | 49.5% |
| 3971002 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.87 | 76.0 | 6.75e-01 | 94.5% | 69.3% |
| 3590755 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.87 | 75.0 | 7.33e-01 | 94.5% | 86.7% |
| 2142296 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.87 | 75.0 | 6.14e-01 | 94.5% | 53.1% |
| 3247204 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.87 | 75.0 | 7.32e-01 | 94.5% | 86.7% |
| 3987389 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.87 | 75.0 | 4.26e-01 | 94.5% | 10.3% |
| 4965632 | 192.7.1.85 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › DUF4349 | 0.87 | 76.0 | 7.22e-01 | 96.4% | 81.5% |
| 3370743 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.87 | 75.0 | 6.55e-01 | 94.5% | 65.0% |
| 3692897 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.87 | 75.0 | 6.73e-01 | 94.5% | 69.3% |
| 4010395 | 622.4.1.26 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › HisKA | 0.87 | 75.0 | 6.88e-01 | 94.5% | 75.7% |
| 4041347 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.86 | 75.0 | 5.85e-01 | 94.5% | 47.3% |
| 3699098 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.86 | 75.0 | 6.54e-01 | 94.5% | 65.0% |
| 3982421 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.86 | 75.0 | 6.68e-01 | 94.5% | 70.7% |
| 3934585 | 3755.3.1.465 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A | 0.86 | 75.0 | 5.34e-01 | 94.5% | 34.7% |
| 3976663 | 3812.1.1.1 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE › T3SS_needle_E | 0.86 | 75.0 | 7.08e-01 | 94.5% | 80.0% |
| 3973158 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.86 | 75.0 | 6.52e-01 | 94.5% | 65.0% |
| 4221982 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.86 | 74.0 | 6.00e-01 | 94.5% | 52.0% |
| 3366877 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.86 | 74.0 | 4.56e-01 | 94.5% | 17.6% |
| 4551916 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.86 | 78.0 | 5.87e-01 | 100.0% | 47.2% |
| 5041261 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.86 | 74.0 | 5.45e-01 | 94.5% | 38.5% |
| 4962781 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.86 | 74.0 | 6.68e-01 | 96.4% | 80.0% |
| 3215342 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.86 | 73.0 | 6.06e-01 | 94.5% | 54.7% |
| 3559003 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.86 | 74.0 | 5.99e-01 | 94.5% | 52.0% |
| 4613072 | 101.1.2.721 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2, PF27113 | 0.86 | 74.0 | 5.15e-01 | 94.5% | 31.5% |
| 4594578 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.85 | 74.0 | 6.09e-01 | 94.5% | 54.7% |
| 4498502 | 3843.1.1.6 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF | 0.85 | 78.0 | 6.39e-01 | 100.0% | 64.2% |
| 4974349 | 225.1.1.41 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HisKA_2 | 0.85 | 73.0 | 5.08e-01 | 94.5% | 30.6% |
| 5055939 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.85 | 78.0 | 5.40e-01 | 100.0% | 41.8% |
| 3741785 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.85 | 73.0 | 5.94e-01 | 94.5% | 52.0% |
| 2814930 | 150.1.1.14 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › EncFtn-like | 0.85 | 72.0 | 6.28e-01 | 94.5% | 62.7% |
| 3732192 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.84 | 74.0 | 6.64e-01 | 96.4% | 74.7% |
| 4446039 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.84 | 72.0 | 6.67e-01 | 94.5% | 74.3% |
| 3965830 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.84 | 72.0 | 5.85e-01 | 94.5% | 52.0% |
| 4463756 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.84 | 72.0 | 6.65e-01 | 94.5% | 74.3% |
| 3661727 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.84 | 73.0 | 4.83e-01 | 96.4% | 25.9% |
| 5044927 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.83 | 76.0 | 7.44e-01 | 100.0% | 93.3% |
| 3985434 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.83 | 71.0 | 6.00e-01 | 94.5% | 57.8% |
| 4568335 | 3812.1.1.8 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE › DUF5398 | 0.83 | 76.0 | 7.02e-01 | 100.0% | 79.7% |
| 3731364 | 3922.1.1.137 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › HisKA | 0.83 | 71.0 | 6.73e-01 | 94.5% | 81.5% |
| 3945517 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.83 | 70.0 | 5.85e-01 | 94.5% | 54.7% |
| 3661584 | 4006.1.1.6 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › DUF3475 | 0.83 | 70.0 | 4.65e-01 | 94.5% | 24.2% |
| 3434585 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.83 | 76.0 | 4.64e-01 | 100.0% | 19.7% |
| 4102446 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.82 | 75.0 | 4.97e-01 | 100.0% | 27.3% |
| 3345952 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.82 | 74.0 | 6.35e-01 | 100.0% | 75.3% |
| 5013534 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.80 | 73.0 | 5.18e-01 | 100.0% | 35.5% |
| 3978513 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.80 | 69.0 | 6.05e-01 | 94.5% | 65.0% |
| 5082443 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.80 | 68.0 | 4.97e-01 | 94.5% | 35.9% |
| 4429835 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.80 | 67.0 | 5.52e-01 | 94.5% | 53.0% |
| 3461932 | 3922.1.1.189 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DUF630 | 0.78 | 63.0 | 5.33e-01 | 90.9% | 100.0% |
| 3704286 | 604.12.1.8 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › KATNA1_MIT | 0.77 | 69.0 | 5.60e-01 | 100.0% | 71.0% |
| 5014863 | 3755.3.1.524 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › AI-2E_transport | 0.76 | 63.0 | 3.95e-01 | 94.5% | 17.1% |
| 3974197 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.74 | 62.0 | 5.49e-01 | 94.5% | 65.0% |
| 3991247 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.73 | 62.0 | 4.08e-01 | 100.0% | 26.9% |
| 3564243 | 601.1.1.68 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › RHG29_45_N | 0.71 | 60.0 | 4.75e-01 | 98.2% | 46.7% |