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NC_053514.1__YP_010013848.1__J4U03_gp093__00093
Bact-VirNC_053514.1__YP_010013848.1__J4U03_gp093__00093
Identity
- Accession:
- NC_053514 ↗
- Kingdom:
- phage
Quality
82.6
mean pLDDT
Taxonomy
TaxID: 2759459
Cluster
View cluster (34 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-88
Domain cluster:
rep: MK448748.1__QBX17976.1__Javan389_0017__00017__D13-80
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 33.0 | 3.76e-01 | 92.0% | 75.4% |
| 1avaA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 28.0 | 3.31e-01 | 90.9% | 65.5% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 32.0 | 3.98e-01 | 95.5% | 94.0% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.57 | 33.0 | 3.72e-01 | 93.2% | 79.7% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 32.0 | 3.66e-01 | 94.3% | 85.5% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.51 | 32.0 | 3.73e-01 | 94.3% | 90.5% |
| 2lkoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 37.0 | 3.25e-01 | 83.0% | 50.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4971071 | 3699.1.1.1 ↗ | beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N | 0.58 | 26.0 | 3.25e-01 | 71.6% | 67.3% |
| 3282992 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.55 | 38.0 | 3.53e-01 | 70.5% | 78.7% |
| 3709736 | 5.1.4.238 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7048 | 0.53 | 39.0 | 2.56e-01 | 92.0% | 17.7% |
| 3412592 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.52 | 37.0 | 2.56e-01 | 75.0% | 91.3% |