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NC_053515.1__YP_010014047.1__J4U04_gp118__00141

Bact-Vir

NC_053515.1__YP_010014047.1__J4U04_gp118__00141

Identity

Accession:
NC_053515 ↗
Kingdom:
phage

Quality

86.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-97
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yw5A01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.68 30.0 3.63e-01 96.9% 61.9%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 25.0 3.03e-01 72.9% 63.5%
2rsmA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 39.0 3.68e-01 94.8% 63.5%
1ksiA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.51 38.0 2.53e-01 80.2% 39.9%
1xkiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 35.0 3.23e-01 83.3% 53.9%
3htxA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 36.0 3.92e-01 93.8% 97.4%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3812547 64.1.1.0 beta meanders › WW domain-like › WW domain › WW domain 0.58 31.0 4.08e-01 91.7% 100.0%
3691966 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 48.0 3.60e-01 97.9% 89.2%