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NC_054393.1__YP_010049718.1__KCH40_gp118__00049

Bact-Vir

NC_054393.1__YP_010049718.1__KCH40_gp118__00049

Identity

Accession:
NC_054393 ↗
Kingdom:
phage

Quality

92.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Typhavirus› Mycobacterium_phage_Typha

TaxID: 2517971

Cluster

View cluster (16 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-148
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nemA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 37.0 4.05e-01 90.3% 79.0%
3cjrB01 3.30.1550.10 Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain 0.58 31.0 4.17e-01 99.3% 100.0%
3n54B01 6.20.190.10 Special › Other non-globular › Nuclear Transport Factor 2; Chain: A, › Nutrient germinant receptor protein C, domain 1 0.57 22.0 3.28e-01 100.0% 78.7%
5oomJ01 3.30.1550.10 Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain 0.57 30.0 4.01e-01 85.8% 100.0%
3qwnD01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.56 31.0 3.92e-01 91.0% 100.0%
6xmtA02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.55 30.0 2.77e-01 90.3% 39.9%
3f1zI00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 36.0 3.85e-01 88.8% 75.0%
5aj3Q00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 35.0 3.83e-01 94.8% 78.0%
4hceA00 2.40.50.860 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 44.0 4.48e-01 89.6% 93.0%
4gnxC03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 45.0 4.06e-01 95.5% 90.2%
1wibA00 3.30.1550.10 Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain 0.50 27.0 3.20e-01 90.3% 75.0%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3283647 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.85 71.0 7.33e-01 85.8% 94.4%
3619975 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 40.0 5.03e-01 91.8% 93.8%
4317833 2.1.1.264 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › BrxL_N 0.66 40.0 4.09e-01 88.8% 60.8%
3407895 2.1.1.42 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.63 47.0 4.69e-01 90.3% 75.0%
3931699 2.1.1.42 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.63 47.0 4.55e-01 89.6% 70.0%
4187609 2.1.1.127 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.62 38.0 4.45e-01 89.6% 86.3%
3588822 2.1.1.85 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecJ_OB 0.62 40.0 4.28e-01 95.5% 74.8%
4988038 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 45.0 4.73e-01 89.6% 89.2%
3956143 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 37.0 4.42e-01 87.3% 93.3%
4969369 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 36.0 3.79e-01 88.1% 64.8%
4216224 2.1.1.42 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.59 46.0 4.34e-01 89.6% 68.1%
4458313 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.59 37.0 4.09e-01 87.3% 79.0%
4600598 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 37.0 3.97e-01 87.3% 73.0%
5051439 2.1.1.42 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.54 45.0 4.44e-01 88.1% 91.4%
3674092 2.1.1.68 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI1_C 0.54 42.0 4.06e-01 90.3% 72.3%
177953 2.1.1.68 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI1_C 0.54 41.0 4.01e-01 89.6% 72.2%
4021623 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 47.0 4.61e-01 96.3% 90.3%
3228854 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 41.0 4.09e-01 91.0% 77.9%
4618920 2.1.1.127 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.53 34.0 3.50e-01 91.0% 66.2%
3621460 2.1.1.68 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI1_C 0.52 41.0 4.08e-01 91.0% 77.9%
3884439 2.1.1.68 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI1_C 0.52 39.0 3.99e-01 90.3% 79.3%
3934534 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 40.0 3.99e-01 91.0% 79.3%
3246869 212.1.1.0 ↗ a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.51 35.0 2.96e-01 70.1% 96.2%
3807630 2.1.1.42 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.51 42.0 3.82e-01 89.6% 78.9%
5051147 210.1.1.1 ↗ a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.50 36.0 3.03e-01 75.4% 96.7%
D2 high residues 156-263_277-301
PDB
Domain cluster: rep: 5H_04062016_scaffold_1_prodigal-single.1__X__X__00437__D55-187
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7vd7A01 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.65 32.0 3.82e-01 75.9% 67.4%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.60 37.0 3.41e-01 82.7% 47.4%
4r8oA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.55 33.0 3.84e-01 74.4% 82.7%
4kt3B00 3.10.450.170 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › type vi secretion system effector-immunity co pseudomonas protegens 0.53 36.0 3.73e-01 88.7% 71.9%
1zodA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.51 37.0 3.66e-01 100.0% 70.9%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3228525 241.15.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.74 57.0 6.24e-01 100.0% 96.4%
3941745 241.15.1.4 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › DUF932 0.66 59.0 5.72e-01 98.5% 86.2%
3940149 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.60 38.0 4.50e-01 90.2% 95.6%
5020330 868.1.1.1 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.56 34.0 2.91e-01 78.9% 38.0%
3330850 243.3.1.12 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › SQAPI 0.55 39.0 4.43e-01 79.7% 97.0%
4059717 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.54 34.0 4.14e-01 89.5% 100.0%
3236951 243.3.1.35 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 0.53 38.0 3.55e-01 72.9% 86.3%
2545212 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.51 37.0 3.29e-01 75.2% 59.6%
5037155 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 43.0 3.00e-01 93.2% 84.0%
3929694 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 45.0 3.06e-01 100.0% 75.4%
3593270 897.1.1.0 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 0.50 43.0 3.67e-01 92.5% 56.8%
3169840 897.1.1.1 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.50 42.0 3.64e-01 91.7% 59.0%
D3 high residues 315-398
PDB
Domain cluster: rep: IMGVR_UViG_3300006204_000297-3300006204-Ga0081182_100052913__D268-352
CATH (66)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bbrM00 1.10.472.170 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.72 58.0 4.37e-01 89.3% 37.3%
1c9bA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.71 56.0 5.23e-01 89.3% 67.0%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.71 56.0 5.39e-01 89.3% 75.5%
1c9bA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.71 58.0 5.53e-01 92.9% 76.3%
1aisB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.71 58.0 5.47e-01 92.9% 74.7%
4yosA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.70 59.0 4.77e-01 92.9% 50.0%
7jv7B01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.69 58.0 4.82e-01 94.0% 52.7%
5xs2B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.69 58.0 5.04e-01 92.9% 67.4%
2w96A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.69 56.0 5.08e-01 92.9% 65.5%
2ivxB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.69 57.0 4.86e-01 94.0% 55.0%
1zp2A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.69 58.0 5.29e-01 92.9% 70.5%
6z4xA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 57.0 4.66e-01 90.5% 49.0%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 58.0 5.05e-01 96.4% 70.7%
5l3wA01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.68 48.0 4.82e-01 77.4% 72.6%
1f5qB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 55.0 5.12e-01 94.0% 68.8%
4unfA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.68 48.0 4.29e-01 92.9% 53.0%
2lyiA01 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.67 60.0 4.99e-01 100.0% 68.2%
1zp2A01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.67 54.0 4.85e-01 94.0% 63.5%
2i53A01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.67 56.0 4.78e-01 94.0% 57.3%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.67 56.0 5.28e-01 94.0% 75.7%
3hyuA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.66 48.0 4.10e-01 77.4% 88.7%
2ivxB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 56.0 5.03e-01 94.0% 67.8%
2f2cA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 55.0 5.14e-01 94.0% 76.4%
3h4cA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 55.0 5.30e-01 94.0% 81.2%
1bqbA02 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.65 56.0 4.72e-01 96.4% 97.2%
3nz4B03 1.10.274.20 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 0.65 54.0 5.11e-01 94.0% 86.5%
4f0uA00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.64 46.0 3.79e-01 76.2% 78.1%
2g8lB01 1.10.8.380 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 0.64 45.0 4.94e-01 86.9% 92.5%
2gfhA02 1.20.120.710 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain 0.63 50.0 5.02e-01 92.9% 83.7%
1wlmA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.63 55.0 5.17e-01 98.8% 94.2%
1gcvB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.63 46.0 4.02e-01 79.8% 88.2%
1sseB00 1.10.238.100 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › YAP1 redox domain. Chain B 0.60 41.0 4.10e-01 86.9% 68.6%
6ukcA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.60 45.0 3.88e-01 79.8% 81.2%
2oxlA00 1.20.5.5260 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.59 40.0 4.48e-01 76.2% 96.8%
4r24B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.59 42.0 4.21e-01 77.4% 72.9%
2iw3A02 1.20.1390.20 Mainly Alpha › Up-down Bundle › PWI domain › 0.59 49.0 4.89e-01 95.2% 90.0%
3iibA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.59 42.0 2.95e-01 76.2% 80.8%
5a0uA01 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.58 50.0 2.93e-01 97.6% 60.6%
1zv1A00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.58 35.0 3.95e-01 75.0% 83.1%
3f2eA00 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 47.0 4.80e-01 92.9% 90.4%
1d2zB00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.57 51.0 4.24e-01 100.0% 84.0%
1dd9A03 1.20.50.20 Mainly Alpha › Up-down Bundle › Pheromone ER-1 › DnaG, RNA polymerase domain, helical bundle 0.57 35.0 4.00e-01 71.4% 88.1%
7dl9B02 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.57 44.0 3.38e-01 84.5% 95.1%
3fblA00 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 49.0 4.96e-01 94.0% 97.6%
3fbzA01 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 49.0 4.58e-01 95.2% 80.4%
1u89A00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.56 45.0 3.82e-01 86.9% 69.8%
3f4mA00 1.20.1440.160 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like 0.56 45.0 3.74e-01 89.3% 77.9%
1vplA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 46.0 3.33e-01 91.7% 31.9%
1or4B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.55 47.0 3.90e-01 97.6% 60.8%
2fzfA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.55 45.0 3.80e-01 91.7% 83.3%
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.54 37.0 4.04e-01 73.8% 88.1%
4r42A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.54 45.0 3.50e-01 91.7% 73.3%
1cg5B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.54 47.0 4.04e-01 100.0% 94.3%
8agyA01 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.54 44.0 3.25e-01 91.7% 59.4%
2hpsA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 47.0 3.68e-01 98.8% 62.5%
7e4gA01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.53 46.0 3.51e-01 95.2% 60.9%
6bldA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.53 45.0 2.97e-01 100.0% 61.6%
2vkjA00 1.20.58.2030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 40.0 3.74e-01 89.3% 65.1%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.52 33.0 2.96e-01 72.6% 43.0%
3x0uB01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.52 45.0 3.32e-01 100.0% 87.7%
2lqgA00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.52 41.0 3.52e-01 86.9% 80.4%
3qqaA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 36.0 3.11e-01 73.8% 79.4%
1tu9A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.51 43.0 3.84e-01 100.0% 72.5%
5lohA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.51 39.0 3.21e-01 88.1% 47.2%
1f1mA00 1.20.120.240 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 0.51 40.0 3.26e-01 85.7% 64.8%
3k8pC01 1.20.58.1440 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.50 36.0 3.41e-01 77.4% 70.5%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1879330 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.74 58.0 5.66e-01 88.1% 76.9%
4990528 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.74 56.0 5.63e-01 94.0% 80.0%
4965872 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.74 57.0 5.39e-01 94.0% 69.0%
4955899 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.72 54.0 4.98e-01 91.7% 60.9%
3458610 101.1.10.13 ↗ alpha arrays › HTH › HTH › Cyclin-like › DUF3452 0.72 61.0 5.23e-01 91.7% 66.2%
3703267 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.71 56.0 4.97e-01 92.9% 59.2%
5071262 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 61.0 3.98e-01 97.6% 33.3%
4927466 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.71 55.0 5.39e-01 88.1% 77.8%
3378930 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.70 57.0 4.96e-01 94.0% 58.4%
3185992 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.70 59.0 5.04e-01 92.9% 57.0%
4982983 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.70 57.0 5.49e-01 92.9% 77.9%
3443564 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.70 58.0 4.74e-01 94.0% 48.1%
4969272 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.70 58.0 5.12e-01 91.7% 62.5%
5025644 148.1.3.20 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.70 56.0 5.72e-01 94.0% 91.3%
4944102 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.69 54.0 5.34e-01 89.3% 78.9%
3816829 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.69 58.0 4.72e-01 92.9% 49.4%
3901205 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.69 57.0 5.17e-01 95.2% 66.1%
3627307 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.69 57.0 4.49e-01 94.0% 42.8%
4000036 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.69 57.0 4.90e-01 94.0% 57.0%
3493738 101.1.10.17 ↗ alpha arrays › HTH › HTH › Cyclin-like › CycT2-like_C 0.68 59.0 5.18e-01 95.2% 65.0%
5064398 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.68 56.0 5.31e-01 95.2% 75.0%
3874422 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.68 57.0 4.98e-01 92.9% 61.6%
3721805 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.68 53.0 4.81e-01 89.3% 62.3%
3833444 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.67 56.0 4.90e-01 92.9% 61.7%
4023031 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.67 57.0 4.49e-01 94.0% 75.4%
4955902 2004.1.1.76 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.67 58.0 3.89e-01 100.0% 35.3%
3707352 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.67 52.0 4.92e-01 86.9% 69.2%
3960471 592.2.1.0 ↗ alpha arrays › PWI domain-like › YugE-like › YugE-like 0.66 50.0 5.36e-01 88.1% 93.2%
4020945 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.66 47.0 4.99e-01 84.5% 82.7%
3610347 103.2.1.0 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone 0.65 52.0 5.18e-01 92.9% 85.9%
3701812 2498.5.1.0 ↗ mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like 0.65 55.0 5.02e-01 96.4% 97.4%
3693848 101.1.9.77 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › PAP1 0.63 43.0 4.85e-01 84.5% 100.0%
3701680 4953.1.1.0 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.63 52.0 4.94e-01 91.7% 89.9%
3578166 3198.1.1.1 ↗ alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA 0.63 48.0 4.14e-01 86.9% 51.1%
3930447 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.63 47.0 3.85e-01 81.0% 73.8%
3063909 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.61 44.0 2.83e-01 76.2% 75.9%
4977760 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.61 52.0 4.68e-01 95.2% 79.2%
4014053 148.1.3.216 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF7069 0.61 45.0 4.62e-01 85.7% 80.0%
1687145 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.61 43.0 4.11e-01 73.8% 77.6%
4013315 148.1.3.216 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF7069 0.60 48.0 4.55e-01 84.5% 71.0%
4021723 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.60 43.0 4.15e-01 85.7% 66.3%
3205121 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.59 41.0 4.16e-01 83.3% 75.0%
3210018 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.59 42.0 4.01e-01 86.9% 61.0%
3272220 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.59 42.0 3.94e-01 75.0% 73.3%
5002943 148.1.3.4 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › CbbQ_C 0.57 44.0 4.41e-01 95.2% 81.1%
4147448 148.1.3.4 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › CbbQ_C 0.57 44.0 4.39e-01 95.2% 81.1%
3804319 102.1.1.172 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › PF31137 0.56 48.0 4.60e-01 100.0% 95.0%
3929607 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.56 49.0 3.94e-01 98.8% 70.6%
3281786 371.1.1.0 ↗ few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 0.56 48.0 4.11e-01 95.2% 90.4%
3953197 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.56 39.0 3.80e-01 77.4% 65.3%
3978496 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.56 44.0 4.83e-01 91.7% 100.0%
4977718 7575.1.1.0 ↗ a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like 0.56 48.0 3.22e-01 97.6% 59.7%
3587238 186.1.1.3 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_5 0.55 46.0 4.35e-01 95.2% 82.9%
4061722 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.55 48.0 4.37e-01 100.0% 82.6%
3871432 108.1.1.68 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › TPGS1_C 0.55 43.0 3.79e-01 86.9% 73.8%
4220256 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.55 44.0 4.10e-01 92.9% 82.7%
5041258 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.54 45.0 4.00e-01 95.2% 76.0%
4022116 5050.1.1.1 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr 0.53 43.0 3.14e-01 92.9% 84.9%
5030306 186.1.1.4 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.53 46.0 4.39e-01 92.9% 83.2%
3278372 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.52 36.0 3.91e-01 97.6% 93.8%
3621664 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.51 42.0 3.20e-01 94.0% 37.6%
3718172 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.51 44.0 4.06e-01 100.0% 86.1%