←Back to structures
NC_054438.1__YP_010051095.1__KDJ61_gp06__00006
Bact-VirNC_054438.1__YP_010051095.1__KDJ61_gp06__00006
Identity
- Accession:
- NC_054438 ↗
- Kingdom:
- phage
Quality
77.0
mean pLDDT
Taxonomy
TaxID: 2744004
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-67
Domain cluster:
rep: NC_030935.1__YP_009276116.1__BH785_gp23__00023__D8-73
D2
medium
residues 142-200
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_15340_prodigal-single.1__X__X__00357__D6-59
D3
medium
residues 201-257
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.59 | 42.0 | 4.53e-01 | 96.5% | 87.8% |
| 2x6hA03 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.58 | 47.0 | 3.37e-01 | 98.2% | 66.5% |
| 3cb2A03 | 1.10.287.600 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.56 | 43.0 | 4.22e-01 | 94.7% | 78.7% |
| 3zdmB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.54 | 42.0 | 4.43e-01 | 98.2% | 94.0% |
| 1x0tA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.53 | 46.0 | 4.54e-01 | 100.0% | 90.2% |
| 2qgnA02 | 1.10.287.890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 0.51 | 44.0 | 3.95e-01 | 98.2% | 74.4% |
| 1dd5A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.51 | 45.0 | 3.67e-01 | 100.0% | 88.1% |