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NC_054466.1__YP_010052994.1__KE336_gp24__00024

Bact-Vir

NC_054466.1__YP_010052994.1__KE336_gp24__00024

Identity

Accession:
NC_054466 ↗
Kingdom:
phage

Quality

92.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-48
PDB
D2 high residues 61-103
PDB
Domain cluster: representative
CATH (78)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4jp0A03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.83 61.0 6.62e-01 90.7% 100.0%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 65.0 6.06e-01 100.0% 69.6%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 65.0 6.18e-01 97.7% 74.5%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 70.0 6.64e-01 100.0% 82.7%
1o57A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 68.0 5.83e-01 100.0% 66.7%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 70.0 6.17e-01 100.0% 69.8%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 68.0 5.64e-01 100.0% 69.2%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 69.0 6.38e-01 100.0% 77.8%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 64.0 6.22e-01 100.0% 81.2%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 67.0 5.74e-01 100.0% 62.0%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 5.13e-01 100.0% 44.1%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 6.30e-01 97.7% 84.0%
2p4wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 4.95e-01 100.0% 39.8%
3majA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 64.0 5.78e-01 100.0% 68.3%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 65.0 5.89e-01 97.7% 69.0%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 58.0 5.81e-01 100.0% 82.2%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 5.46e-01 100.0% 60.6%
4chuA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 66.0 4.73e-01 100.0% 35.7%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 5.24e-01 100.0% 54.0%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 4.85e-01 100.0% 40.4%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 4.39e-01 100.0% 29.3%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 5.53e-01 100.0% 62.7%
1j5yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 66.0 5.81e-01 100.0% 67.2%
4krdB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.75 65.0 4.24e-01 100.0% 24.2%
2hoeA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 59.0 5.46e-01 100.0% 67.2%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 5.42e-01 100.0% 64.0%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 4.62e-01 100.0% 35.7%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 5.44e-01 100.0% 66.2%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 6.11e-01 93.0% 100.0%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 5.48e-01 100.0% 65.1%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 4.87e-01 100.0% 46.1%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 60.0 5.33e-01 100.0% 62.1%
6oinA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 5.53e-01 97.7% 62.7%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 4.98e-01 100.0% 50.0%
3mn2A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 63.0 4.74e-01 100.0% 85.2%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.54e-01 97.7% 66.7%
6xiuA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 62.0 4.81e-01 100.0% 53.5%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 5.65e-01 100.0% 73.8%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 60.0 5.58e-01 95.3% 72.7%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.04e-01 100.0% 67.1%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.24e-01 100.0% 64.0%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.30e-01 97.7% 63.4%
2p8tA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 62.0 5.21e-01 100.0% 57.3%
2xrnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 5.40e-01 100.0% 67.2%
3w6kC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 4.88e-01 100.0% 50.6%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 4.58e-01 100.0% 41.4%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.77e-01 100.0% 87.0%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 4.47e-01 100.0% 37.6%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 61.0 5.34e-01 97.7% 64.6%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 61.0 5.48e-01 97.7% 68.9%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 5.01e-01 100.0% 53.8%
5y6iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 5.06e-01 100.0% 58.9%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 4.57e-01 100.0% 44.7%
2kt0A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 59.0 5.84e-01 100.0% 100.0%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 4.79e-01 100.0% 51.9%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.16e-01 100.0% 66.7%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 4.23e-01 100.0% 60.8%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 4.97e-01 100.0% 65.8%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 4.63e-01 100.0% 50.0%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 55.0 4.15e-01 100.0% 36.0%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 56.0 4.40e-01 100.0% 86.5%
1hsjB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 4.61e-01 100.0% 51.2%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 55.0 5.58e-01 97.7% 100.0%
1cxsA02 3.40.228.10 Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 0.67 58.0 3.61e-01 100.0% 32.1%
3lstA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 54.0 4.49e-01 100.0% 48.8%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 54.0 4.98e-01 97.7% 73.8%
2k9sA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 54.0 4.22e-01 100.0% 51.4%
2hyjA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 51.0 5.03e-01 86.0% 91.3%
2zkzC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 4.50e-01 100.0% 48.3%
3eetA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 4.92e-01 100.0% 73.8%
3oouA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 55.0 5.17e-01 100.0% 80.0%
3dteA02 1.10.10.1030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain 0.65 50.0 5.12e-01 93.0% 100.0%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 52.0 4.24e-01 100.0% 47.2%
3gwzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 51.0 4.24e-01 97.7% 47.2%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 51.0 4.81e-01 100.0% 96.4%
3ni7A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.63 50.0 3.49e-01 100.0% 29.9%
5k7fA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 47.0 4.77e-01 86.0% 100.0%
1zboA02 1.10.4060.10 Mainly Alpha › Orthogonal Bundle › LON domain-like fold › BPP1347 like domain 0.54 38.0 3.10e-01 83.7% 39.3%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5059468 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.87 76.0 6.09e-01 100.0% 51.8%
4970178 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.85 73.0 6.45e-01 100.0% 66.2%
4948834 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 75.0 7.50e-01 100.0% 100.0%
5080838 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.82 70.0 6.39e-01 100.0% 73.3%
4945097 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 70.0 6.34e-01 97.7% 73.3%
3896788 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 71.0 7.09e-01 100.0% 97.8%
5005434 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.79 67.0 5.14e-01 100.0% 43.2%
4948953 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.77 64.0 5.63e-01 100.0% 63.1%
4983312 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.76 65.0 5.17e-01 100.0% 47.7%
3279999 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.76 63.0 4.86e-01 100.0% 41.0%
5027272 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.76 63.0 5.01e-01 100.0% 45.6%
4962131 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.76 60.0 4.70e-01 97.7% 41.1%
5069356 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 61.0 4.91e-01 100.0% 44.4%
4984935 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 63.0 4.02e-01 100.0% 19.1%
5058585 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.75 62.0 5.65e-01 100.0% 69.5%
5010043 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.75 62.0 4.79e-01 100.0% 41.4%
4958066 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.75 62.0 4.70e-01 100.0% 39.0%
4976486 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 62.0 5.67e-01 97.7% 76.7%
5012154 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.75 61.0 5.14e-01 100.0% 52.6%
5038557 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.75 62.0 4.76e-01 100.0% 41.0%
5053414 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.75 62.0 4.44e-01 100.0% 31.5%
4931277 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.75 62.0 4.23e-01 100.0% 26.5%
4979194 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 61.0 4.81e-01 100.0% 43.2%
3998943 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.75 64.0 4.82e-01 97.7% 54.3%
5002415 101.1.2.728 alpha arrays › HTH › HTH › winged helix domain › PF31122 0.75 61.0 4.61e-01 100.0% 37.3%
5055888 101.1.2.222 alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N 0.75 61.0 5.19e-01 100.0% 54.7%
5072472 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 60.0 5.31e-01 97.7% 61.5%
3970742 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 65.0 5.97e-01 97.7% 94.5%
5035263 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.74 61.0 4.64e-01 100.0% 39.0%
5033276 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.74 61.0 4.20e-01 100.0% 27.2%
3339569 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.74 65.0 5.07e-01 97.7% 51.7%
3987671 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 63.0 5.83e-01 97.7% 87.3%
4935554 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 61.0 5.42e-01 100.0% 64.1%
4303638 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.74 63.0 5.35e-01 100.0% 58.7%
3389326 101.1.2.383 alpha arrays › HTH › HTH › winged helix domain › HTH_69 0.74 61.0 5.71e-01 97.7% 78.2%
3969100 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.74 65.0 6.04e-01 100.0% 94.5%
137166 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 60.0 5.35e-01 100.0% 63.1%
5071074 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.74 60.0 4.68e-01 100.0% 41.0%
3860590 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.74 62.0 5.96e-01 97.7% 82.0%
5008053 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.74 60.0 4.58e-01 100.0% 39.0%
4950264 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.73 62.0 5.66e-01 100.0% 71.7%
4992769 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.73 59.0 4.50e-01 100.0% 37.3%
3404575 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.73 64.0 5.01e-01 97.7% 48.9%
4309654 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.73 65.0 5.97e-01 100.0% 80.0%
5005197 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 59.0 5.29e-01 100.0% 63.1%
4928531 101.1.2.728 alpha arrays › HTH › HTH › winged helix domain › PF31122 0.73 60.0 4.70e-01 100.0% 43.2%
5047085 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 60.0 5.03e-01 100.0% 52.5%
3926999 101.1.15.0 alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.73 63.0 5.07e-01 100.0% 77.6%
4954129 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.73 59.0 4.81e-01 100.0% 48.2%
5051226 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.73 59.0 4.59e-01 100.0% 41.0%
3949338 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.73 60.0 5.77e-01 95.3% 100.0%
3505605 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.72 64.0 4.96e-01 97.7% 47.8%
2966577 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 59.0 5.29e-01 97.7% 75.8%
5014461 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 62.0 6.15e-01 100.0% 95.6%
4323843 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.72 60.0 5.80e-01 95.3% 100.0%
4348165 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.72 59.0 5.22e-01 95.3% 78.5%
3725940 101.1.15.0 alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.72 62.0 5.04e-01 100.0% 71.8%
3964790 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.72 59.0 4.55e-01 97.7% 50.5%
4663875 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.72 61.0 3.83e-01 97.7% 17.5%
4267606 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.72 59.0 5.72e-01 95.3% 98.0%
3516486 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.72 63.0 4.97e-01 100.0% 63.3%
4008367 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 58.0 5.44e-01 95.3% 89.1%
4980031 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 61.0 5.39e-01 100.0% 69.2%
3946840 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.71 57.0 5.73e-01 93.0% 97.8%
4998401 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 61.0 5.84e-01 100.0% 88.0%
4216701 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 57.0 5.55e-01 95.3% 96.0%
3591036 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 60.0 5.59e-01 97.7% 94.5%
3513766 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.71 59.0 4.34e-01 100.0% 88.0%
3982082 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 57.0 5.37e-01 95.3% 92.7%
4151588 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 54.0 5.22e-01 88.4% 98.0%
3707219 4964.1.1.0 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.70 61.0 4.49e-01 100.0% 35.8%
4158455 101.1.2.464 alpha arrays › HTH › HTH › winged helix domain › HTH_AraC 0.70 58.0 5.82e-01 100.0% 95.6%
4031726 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 59.0 5.68e-01 97.7% 86.0%
3277965 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 59.0 5.67e-01 97.7% 100.0%
3588540 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.70 60.0 5.58e-01 100.0% 94.5%
3978422 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.69 56.0 5.32e-01 97.7% 94.5%
4010677 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.69 56.0 4.47e-01 100.0% 54.0%
3289320 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 56.0 5.27e-01 95.3% 80.0%
4225050 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.68 56.0 5.45e-01 100.0% 86.0%
3283917 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.68 55.0 5.34e-01 95.3% 98.0%
3942713 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 53.0 5.15e-01 93.0% 100.0%
3968298 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.67 54.0 5.13e-01 97.7% 81.8%
4007690 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 52.0 4.93e-01 93.0% 87.3%
5031411 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.66 55.0 4.65e-01 100.0% 55.0%
4154795 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 53.0 5.24e-01 88.4% 93.3%
4961645 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.65 55.0 4.44e-01 97.7% 46.7%
3590374 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.65 55.0 5.13e-01 100.0% 80.0%
5071759 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.65 53.0 4.27e-01 97.7% 44.2%
4193366 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.65 52.0 4.07e-01 100.0% 40.0%
4929389 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 53.0 4.36e-01 100.0% 48.9%
3974067 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 50.0 4.98e-01 90.7% 91.1%
4560539 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 54.0 5.18e-01 97.7% 88.0%
D3 high residues 114-164
PDB
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u3eM02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 71.0 6.52e-01 100.0% 76.5%
2vfrA02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.65 46.0 3.55e-01 100.0% 30.8%
1ileA02 3.90.740.10 Alpha Beta › Alpha-Beta Complex › Isoleucyl-tRNA Synthetase; domain 2 › Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.65 42.0 2.87e-01 100.0% 17.4%
4iauA01 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.64 41.0 3.59e-01 100.0% 42.3%
1zr6A02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.60 43.0 3.30e-01 100.0% 29.8%
2c60A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.59 44.0 3.92e-01 84.3% 96.2%
4nx9A02 2.60.40.4390 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 49.0 3.82e-01 100.0% 61.2%
3cw3A00 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.58 40.0 3.33e-01 100.0% 39.8%
2p17A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 41.0 2.64e-01 100.0% 15.7%
3otpA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.57 41.0 2.81e-01 78.4% 83.3%
3omzA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 46.0 3.85e-01 100.0% 61.2%
4m0wA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.55 49.0 3.59e-01 100.0% 39.4%
1nc7A00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.55 45.0 3.43e-01 100.0% 39.7%
2mtzA01 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.54 39.0 3.93e-01 76.5% 92.0%
4r3dA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.54 47.0 3.48e-01 100.0% 39.4%
2atpD00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 3.56e-01 100.0% 59.8%
1h2vZ00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.53 46.0 3.84e-01 100.0% 84.9%
5ce8A01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.53 42.0 3.33e-01 92.2% 95.9%
1wh2A01 3.30.1490.40 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain 0.53 38.0 3.61e-01 100.0% 65.6%
6mv2A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 39.0 3.21e-01 86.3% 82.9%
1gpcA00 3.90.198.10 Alpha Beta › Alpha-Beta Complex › Replication Fork Single-Stranded DNA Binding Protein › Replication Fork Single-Stranded Dna Binding Protein 0.52 41.0 2.88e-01 100.0% 24.3%
5c8qB02 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.52 38.0 3.96e-01 80.4% 91.3%
1hi8A03 3.30.70.1600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 40.0 2.97e-01 100.0% 61.9%
2f4nB02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.51 44.0 3.62e-01 98.0% 68.1%
6pxyA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 41.0 3.36e-01 100.0% 73.5%
3in6A02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 43.0 3.37e-01 100.0% 44.4%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.50 44.0 3.46e-01 100.0% 53.2%
4he6A00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.50 44.0 3.67e-01 100.0% 62.9%
4llgM00 3.10.20.510 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor 0.50 38.0 3.85e-01 100.0% 88.0%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2876 101.1.14.2 alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › I-HmuI_NUMOD-like 0.81 71.0 6.49e-01 100.0% 75.4%
3171408 101.1.14.3 alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 0.76 64.0 6.47e-01 94.1% 100.0%
4414927 101.1.14.3 alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 0.75 65.0 5.95e-01 100.0% 79.7%
3587703 101.1.14.0 alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases 0.75 62.0 6.33e-01 96.1% 100.0%
4982454 284.1.1.0 a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.63 52.0 4.98e-01 98.0% 90.0%
3471394 217.1.1.0 a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain 0.62 43.0 2.89e-01 100.0% 17.0%
3585355 376.1.1.72 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › EHMT1-2_CRR 0.58 41.0 3.33e-01 100.0% 39.0%
3258059 4357.1.1.1 beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.57 49.0 4.40e-01 100.0% 90.7%
3411379 11.1.1.536 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 0.57 48.0 3.46e-01 100.0% 61.6%
4959407 304.163.1.3 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › PF31118 0.57 44.0 4.49e-01 100.0% 90.0%
5027017 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.57 37.0 2.50e-01 100.0% 16.2%
None 0.56 37.0 2.52e-01 100.0% 17.0%
3959955 304.163.1.3 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › PF31118 0.53 39.0 4.11e-01 100.0% 93.3%
4926963 4020.1.1.1 a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › Aminotran_4 0.52 41.0 3.15e-01 92.2% 88.1%
3925464 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.52 39.0 3.55e-01 88.2% 100.0%
3692430 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.51 43.0 4.00e-01 100.0% 97.1%
3960590 210.1.3.0 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.50 44.0 2.97e-01 100.0% 31.0%
3548295 221.1.1.53 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_3 0.50 41.0 3.58e-01 100.0% 57.3%