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NC_054647.1__YP_010053947.1__KGB47_gp12__00012

Bact-Vir

NC_054647.1__YP_010053947.1__KGB47_gp12__00012

Identity

Accession:
NC_054647 ↗
Kingdom:
phage

Quality

89.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Akiravirus› Salmonella_phage_Akira

TaxID: 2562461

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-57
PDB
Domain cluster: rep: OP889247.1__WAX22170.1__AVP1_0060__00060__D14-51
D2 high residues 65-134
PDB
Domain cluster: rep: MZ501051.1__QXV76169.1__bas01_0038__00038__D174-271
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18668.7 best Tail_spike_N 78.5 4.50e-22 84.3% 80.0%
D3 medium residues 137-215_272-431
PDB
Domain cluster: rep: ON809764.1__WDS51544.1__SeF6a_232__00224__D555-817
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF09251.17 best PhageP22-tail 234.0 4.20e-69 67.0% 29.2%
PF09251.17 PhageP22-tail 116.5 1.60e-33 33.9% 14.3%
D4 medium residues 629-672
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09251.17 best PhageP22-tail 43.8 1.80e-11 97.7% 8.2%
CATH (78)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1clwA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.98 92.0 5.02e-01 100.0% 8.5%
3riqA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.92 83.0 4.54e-01 97.7% 7.9%
6pxcA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.83 72.0 5.47e-01 100.0% 51.0%
2b1xA02 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.83 68.0 4.86e-01 90.9% 31.7%
3vcaA02 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.82 66.0 4.82e-01 90.9% 33.6%
1i1nA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.80 69.0 4.35e-01 100.0% 24.1%
7fjlA01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.79 63.0 4.47e-01 90.9% 29.9%
7ylsB01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.79 65.0 4.87e-01 93.2% 41.7%
7q04F01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.78 63.0 4.77e-01 93.2% 41.3%
3gkeA01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.78 58.0 4.18e-01 88.6% 28.5%
2de6A02 2.20.25.680 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.76 58.0 5.31e-01 86.4% 63.8%
7szeB01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.75 60.0 4.58e-01 90.9% 38.3%
1z01A02 2.20.25.680 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.75 57.0 5.16e-01 86.4% 60.7%
2zylA01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.74 58.0 4.14e-01 88.6% 28.9%
1dgmA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.74 64.0 3.92e-01 100.0% 26.1%
1nbwA04 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.74 51.0 3.63e-01 75.0% 24.2%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.73 49.0 3.72e-01 70.5% 33.7%
2db2A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.72 49.0 3.88e-01 72.7% 36.2%
3d7rA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.71 48.0 2.90e-01 70.5% 21.6%
1reoA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.71 48.0 3.33e-01 70.5% 21.6%
4bwgD00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 47.0 3.63e-01 70.5% 30.9%
3gceA00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.71 54.0 4.22e-01 90.9% 37.5%
2h7fX02 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.70 48.0 3.04e-01 72.7% 15.8%
3k2tA01 3.30.505.50 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain 0.70 56.0 5.60e-01 93.2% 100.0%
2jo6A00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.69 56.0 4.26e-01 93.2% 39.1%
2jraA01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.68 49.0 5.05e-01 79.5% 85.7%
1jyaB00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.68 52.0 3.77e-01 84.1% 39.7%
2lojA01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.68 50.0 5.17e-01 93.2% 94.9%
1fo0B00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 50.0 3.88e-01 93.2% 33.9%
2wtzA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.67 48.0 3.03e-01 77.3% 15.8%
1jnrB02 6.20.260.10 Special › Other non-globular › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Adenylylsulphate reductase, beta subunit, C-terminal domain 0.66 45.0 3.73e-01 72.7% 37.3%
2xcmC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 45.0 3.55e-01 70.5% 84.8%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.66 52.0 3.81e-01 95.5% 45.0%
2azpA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.66 51.0 3.61e-01 93.2% 38.5%
2oq8A00 2.60.40.2930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 52.0 3.67e-01 95.5% 46.7%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.64 49.0 2.95e-01 86.4% 14.8%
2xdoD00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 52.0 3.13e-01 100.0% 40.9%
1gqyB02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.63 44.0 2.90e-01 77.3% 16.1%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.62 52.0 3.93e-01 100.0% 76.3%
6j7xC01 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.62 48.0 3.52e-01 90.9% 30.7%
2jozA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 49.0 3.98e-01 95.5% 47.9%
3d4eA02 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.61 48.0 4.15e-01 93.2% 97.4%
1v5vA01 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.61 46.0 3.31e-01 93.2% 36.0%
2pbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 48.0 3.20e-01 100.0% 22.0%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 50.0 2.95e-01 100.0% 37.7%
2cg7A01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.60 44.0 4.41e-01 88.6% 82.6%
1h8mA00 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.60 46.0 3.40e-01 90.9% 66.4%
3ktaA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 48.0 3.43e-01 100.0% 67.1%
1epwA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 47.0 3.01e-01 95.5% 17.2%
5yjwA00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.59 51.0 2.96e-01 100.0% 33.3%
7wffb01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 48.0 2.89e-01 100.0% 12.9%
1o9aA01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.59 43.0 4.34e-01 88.6% 86.4%
3oajA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.59 44.0 3.14e-01 84.1% 35.4%
3n40P02 2.60.40.3200 Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, A domain 0.58 44.0 2.91e-01 90.9% 34.6%
1e69A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 46.0 2.95e-01 97.7% 35.7%
3bn8A00 3.30.1050.10 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain 0.58 45.0 3.47e-01 90.9% 46.6%
2gu1A01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 47.0 3.93e-01 100.0% 96.6%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.57 47.0 3.64e-01 97.7% 44.5%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.57 49.0 4.41e-01 100.0% 76.2%
6aonA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 49.0 3.56e-01 100.0% 91.9%
7jooC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 45.0 3.58e-01 95.5% 42.3%
3g5kA00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.56 45.0 3.12e-01 97.7% 49.7%
3f4lA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.56 48.0 3.09e-01 100.0% 25.6%
4e6xB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.56 44.0 2.77e-01 97.7% 77.4%
3ic9A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 46.0 3.48e-01 100.0% 91.0%
3jbtA05 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 45.0 2.74e-01 97.7% 92.5%
1llnA01 3.40.420.10 Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 0.55 43.0 3.08e-01 100.0% 82.3%
6hoxA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 2.88e-01 95.5% 35.3%
2y1sA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.55 47.0 3.56e-01 100.0% 75.0%
3o4hA01 2.130.10.150 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain 0.54 43.0 2.70e-01 97.7% 26.0%
2m4lA00 2.40.128.360 Mainly Beta › Beta Barrel › Lipocalin › 0.54 39.0 3.10e-01 81.8% 35.4%
3nrlA00 2.40.10.390 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.54 41.0 3.74e-01 93.2% 85.3%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 45.0 2.85e-01 100.0% 48.0%
5iroD00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 46.0 3.55e-01 100.0% 52.0%
5mteA00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.53 43.0 3.20e-01 100.0% 70.1%
6j9eJ00 3.30.160.560 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 38.0 3.54e-01 90.9% 59.1%
2v3aA03 3.30.390.120 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.52 35.0 3.17e-01 70.5% 48.4%
1sgoA01 3.30.2280.10 Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) 0.52 44.0 3.35e-01 100.0% 45.4%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1487323 79.1.1.4 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › PhageP22-tail 0.98 92.0 6.41e-01 100.0% 38.3%
3942731 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.86 63.0 4.87e-01 77.3% 42.2%
3972313 66.1.1.0 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain 0.85 72.0 4.97e-01 93.2% 32.1%
1009 66.1.1.0 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain 0.85 68.0 5.40e-01 88.6% 45.3%
2719643 66.1.1.0 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain 0.85 69.0 5.51e-01 88.6% 48.8%
4486119 4294.1.1.1 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske 0.84 70.0 4.88e-01 93.2% 32.1%
3937472 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.84 73.0 5.53e-01 100.0% 44.8%
4506377 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.83 69.0 4.65e-01 93.2% 29.0%
3646067 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.82 69.0 4.65e-01 93.2% 29.0%
3962266 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.82 64.0 4.64e-01 88.6% 31.7%
5009719 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.82 68.0 4.71e-01 93.2% 31.0%
1732311 66.1.1.0 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain 0.82 65.0 5.39e-01 88.6% 49.4%
4547005 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.82 69.0 4.70e-01 93.2% 30.7%
3349542 4294.1.1.1 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske 0.81 68.0 4.75e-01 93.2% 33.3%
4319192 4294.1.1.1 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske 0.81 67.0 4.56e-01 93.2% 29.0%
3056326 66.1.1.0 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain 0.81 62.0 5.12e-01 86.4% 46.9%
4888405 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.80 65.0 4.74e-01 90.9% 33.9%
2834506 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.80 62.0 5.18e-01 86.4% 49.4%
1150523 66.1.1.0 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain 0.80 63.0 5.19e-01 88.6% 48.1%
3961067 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.80 65.0 4.68e-01 93.2% 34.6%
3974559 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.80 64.0 4.53e-01 90.9% 33.3%
2856288 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.79 62.0 6.39e-01 88.6% 95.1%
4343730 4294.1.1.1 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske 0.79 65.0 4.39e-01 93.2% 28.1%
3286066 3708.1.1.1 ↗ a+b three layers › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › T7SS_ESX1_EccB 0.79 53.0 4.54e-01 70.5% 44.3%
4856563 66.1.1.0 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain 0.79 59.0 6.07e-01 86.4% 92.5%
3727864 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.78 64.0 4.26e-01 93.2% 25.3%
1191474 66.1.1.0 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain 0.78 60.0 5.05e-01 86.4% 50.0%
4542072 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.78 63.0 4.31e-01 93.2% 27.3%
2858693 66.1.1.0 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain 0.76 56.0 5.46e-01 84.1% 73.5%
3585186 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.75 52.0 5.56e-01 93.2% 94.3%
3968312 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.74 59.0 4.47e-01 90.9% 41.7%
4967263 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.74 50.0 3.71e-01 70.5% 29.1%
4487967 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.74 58.0 4.56e-01 90.9% 40.0%
3529132 12.1.1.89 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › GMNC_C 0.72 48.0 5.19e-01 72.7% 91.2%
3608369 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 60.0 3.63e-01 97.7% 93.8%
3692635 66.1.1.0 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain 0.71 58.0 4.81e-01 93.2% 51.2%
4408024 325.1.7.3 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.70 47.0 4.32e-01 70.5% 51.7%
4435672 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.69 46.0 4.15e-01 70.5% 49.2%
1015 66.1.1.2 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske_2 0.69 49.0 5.07e-01 86.4% 87.8%
4029169 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.69 46.0 2.58e-01 70.5% 5.5%
3574409 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.69 47.0 3.71e-01 70.5% 34.4%
3886839 391.1.1.1 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › fn1 0.68 50.0 5.21e-01 86.4% 92.5%
29093 66.1.1.0 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain 0.68 48.0 4.93e-01 84.1% 87.5%
4030628 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.68 55.0 3.14e-01 100.0% 8.4%
3999534 391.1.2.9 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2 0.67 51.0 5.30e-01 90.9% 95.0%
3237475 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.66 45.0 3.76e-01 70.5% 39.7%
3949336 220.1.1.216 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Helicase_IV_N 0.66 44.0 3.36e-01 70.5% 29.1%
4432262 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.66 45.0 3.31e-01 70.5% 28.3%
3282813 268.1.1.0 ↗ a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related 0.66 51.0 4.30e-01 88.6% 53.8%
3590871 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.66 49.0 3.14e-01 88.6% 15.0%
3987919 274.1.1.25 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF 0.65 49.0 3.67e-01 95.5% 32.7%
3559236 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.65 44.0 4.15e-01 70.5% 58.2%
3586827 274.1.1.25 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF 0.65 47.0 3.51e-01 95.5% 30.4%
5036655 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 48.0 4.53e-01 90.9% 65.0%
3767975 220.1.1.38 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.64 43.0 3.32e-01 70.5% 28.2%
4030034 109.4.1.1140 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_PEP5_VPS11 0.64 49.0 2.80e-01 88.6% 13.5%
3892091 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 43.0 2.87e-01 70.5% 17.9%
5051542 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 47.0 3.22e-01 90.9% 20.5%
3781956 4099.1.1.3 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spc24 0.63 45.0 3.88e-01 77.3% 70.7%
3924597 330.16.1.0 ↗ a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain 0.63 42.0 3.74e-01 70.5% 44.3%
4988423 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.62 49.0 4.13e-01 90.9% 58.7%
4833287 205.1.1.35 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4+Fer4_7 0.62 52.0 4.09e-01 100.0% 48.5%
5035008 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.62 55.0 3.66e-01 100.0% 80.6%
3883146 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.62 45.0 4.57e-01 88.6% 88.9%
3302660 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.61 41.0 2.73e-01 72.7% 14.5%
4969778 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.60 46.0 2.87e-01 97.7% 14.4%
3276359 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 52.0 3.03e-01 100.0% 18.5%
4040004 2004.1.1.429 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 0.59 47.0 2.88e-01 97.7% 25.4%
5022798 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 47.0 2.73e-01 90.9% 8.2%
4423609 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.59 47.0 2.87e-01 97.7% 25.1%
3942738 295.1.1.29 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › YjeJ 0.59 52.0 3.55e-01 100.0% 52.9%
5046198 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 43.0 4.14e-01 86.4% 78.2%
5040236 2005.1.1.10 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF 0.57 49.0 3.01e-01 100.0% 47.5%
3534391 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.57 47.0 3.12e-01 95.5% 23.2%
4224041 4.6.1.2 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.57 48.0 4.13e-01 100.0% 64.0%
5065208 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 44.0 4.20e-01 90.9% 78.2%
4079885 274.1.1.25 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF 0.56 48.0 3.81e-01 100.0% 75.8%
4052040 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.56 45.0 3.44e-01 100.0% 54.4%
3942181 6150.1.1.0 ↗ a+b two layers › hypotheical protein Lreu_0056 › hypotheical protein Lreu_0056 › hypotheical protein Lreu_0056 0.56 47.0 3.65e-01 100.0% 49.5%
5015845 230.1.1.3 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS 0.56 43.0 3.05e-01 95.5% 99.4%
5044837 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 41.0 3.88e-01 88.6% 75.0%
3364812 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 47.0 3.01e-01 100.0% 73.5%
5482 205.1.1.47 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, APS-reductase_C, Fer4_7 0.55 46.0 3.27e-01 100.0% 32.9%
5006258 205.1.1.128 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › APS-reductase_C 0.55 46.0 3.29e-01 100.0% 33.8%
4060451 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 45.0 2.93e-01 100.0% 69.6%
3291166 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.55 42.0 3.47e-01 100.0% 53.3%
5038962 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 46.0 4.57e-01 97.7% 97.8%
1877618 330.15.1.1 ↗ a+b two layers › dsRBD-like › VtrA protein periplasmic domain › VtrA protein periplasmic domain › VtrA_C 0.53 44.0 3.62e-01 100.0% 62.2%
4204975 12.3.1.14 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Hepar_II_III 0.52 42.0 2.52e-01 100.0% 26.8%