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NC_054660.1__YP_010055042.1__KGG75_gp68__00068
Bact-VirNC_054660.1__YP_010055042.1__KGG75_gp68__00068
Identity
- Accession:
- NC_054660 ↗
- Kingdom:
- phage
Quality
86.1
mean pLDDT
Taxonomy
TaxID: 2510525
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 10-65
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6iy8A01 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.70 | 51.0 | 3.54e-01 | 78.6% | 30.7% |
| 2gtaA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.57 | 45.0 | 3.71e-01 | 83.9% | 57.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928595 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.72 | 64.0 | 5.19e-01 | 100.0% | 94.3% |
| 4969421 | 4271.1.1.3 ↗ | alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like › DNA_primase_lrg_N | 0.71 | 53.0 | 3.53e-01 | 80.4% | 39.5% |
| 4394509 | 2004.1.1.188 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin2 | 0.69 | 52.0 | 3.60e-01 | 87.5% | 23.8% |
| 3535212 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.63 | 56.0 | 4.77e-01 | 98.2% | 68.9% |
| 3811915 | 243.3.1.26 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › protein_MS5 | 0.53 | 44.0 | 3.45e-01 | 91.1% | 58.3% |