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NC_054660.1__YP_010055042.1__KGG75_gp68__00068

Bact-Vir

NC_054660.1__YP_010055042.1__KGG75_gp68__00068

Identity

Accession:
NC_054660 ↗
Kingdom:
phage

Quality

86.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 10-65
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6iy8A01 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.70 51.0 3.54e-01 78.6% 30.7%
2gtaA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.57 45.0 3.71e-01 83.9% 57.7%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4928595 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.72 64.0 5.19e-01 100.0% 94.3%
4969421 4271.1.1.3 alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like › DNA_primase_lrg_N 0.71 53.0 3.53e-01 80.4% 39.5%
4394509 2004.1.1.188 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin2 0.69 52.0 3.60e-01 87.5% 23.8%
3535212 101.1.1.65 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 0.63 56.0 4.77e-01 98.2% 68.9%
3811915 243.3.1.26 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › protein_MS5 0.53 44.0 3.45e-01 91.1% 58.3%