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NC_054726.1__YP_010059551.1__KHQ86_gp075__00075
Bact-VirNC_054726.1__YP_010059551.1__KHQ86_gp075__00075
Identity
- Accession:
- NC_054726 ↗
- Kingdom:
- phage
Quality
77.9
mean pLDDT
Taxonomy
TaxID: 2656541
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 25-50_158-240
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qlvB02 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.65 | 24.0 | 3.81e-01 | 77.1% | 94.7% |
| 2qrdB01 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.63 | 24.0 | 3.75e-01 | 78.9% | 100.0% |
| 1wibA00 | 3.30.1550.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain | 0.62 | 41.0 | 4.47e-01 | 78.0% | 80.4% |
| 2v8qB00 | 6.20.250.60 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.55 | 26.0 | 3.16e-01 | 81.7% | 67.1% |
| 6dgiA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.54 | 44.0 | 4.00e-01 | 87.2% | 79.2% |
| 3r5xD02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 41.0 | 3.70e-01 | 84.4% | 70.3% |
| 2id0A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 32.0 | 3.57e-01 | 77.1% | 83.3% |
| 1ah5A03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.51 | 24.0 | 2.70e-01 | 75.2% | 51.2% |
| 3cebA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.51 | 36.0 | 4.03e-01 | 78.9% | 94.1% |
| 1kxlA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 41.0 | 3.44e-01 | 86.2% | 92.5% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 25.0 | 3.09e-01 | 84.4% | 78.3% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3509348 | 214.1.1.15 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063, DUF7145 | 0.67 | 31.0 | 2.25e-01 | 83.5% | 16.3% |
| 3517867 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.64 | 32.0 | 3.00e-01 | 84.4% | 40.8% |
| 3511269 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.60 | 31.0 | 3.02e-01 | 84.4% | 45.8% |
| 3508119 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.60 | 31.0 | 3.05e-01 | 84.4% | 46.7% |
| 3782147 | 2008.1.1.79 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Pet127 | 0.56 | 45.0 | 3.05e-01 | 84.4% | 76.9% |
| 3219274 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.55 | 30.0 | 3.33e-01 | 89.0% | 66.3% |
| 3598882 | 4086.1.1.0 ↗ | a+b two layers › AMPKBI-like › AMPKBI-like › AMPKBI-like | 0.52 | 27.0 | 3.11e-01 | 80.7% | 67.5% |
| 3666904 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.52 | 38.0 | 2.73e-01 | 76.1% | 78.5% |
| 3408678 | 2.1.1.86 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_Dis3 | 0.51 | 37.0 | 3.79e-01 | 75.2% | 84.8% |
| 3486954 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 28.0 | 3.18e-01 | 78.9% | 69.4% |
| 4965743 | 7525.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 | 0.50 | 37.0 | 3.07e-01 | 78.9% | 100.0% |
| 3275592 | 206.1.3.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp | 0.50 | 42.0 | 3.38e-01 | 94.5% | 54.5% |