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NC_054726.1__YP_010059600.1__KHQ86_gp175__00124
Bact-VirNC_054726.1__YP_010059600.1__KHQ86_gp175__00124
Identity
- Accession:
- NC_054726 ↗
- Kingdom:
- phage
Quality
64.9
mean pLDDT
Taxonomy
TaxID: 2656541
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 57-128
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5azsC01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.93 | 76.0 | 4.64e-01 | 84.7% | 17.0% |
| 4mt4A00 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.87 | 70.0 | 4.13e-01 | 86.1% | 12.9% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5073290 | 4307.1.1.0 ↗ | alpha duplicates or obligate multimers › EB1 dimerisation domain-like › EB1 dimerisation domain-like › EB1 dimerisation domain-like | 0.85 | 52.0 | 5.05e-01 | 70.8% | 56.2% |
| 3418498 | 5001.1.1.32 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Solute_trans_a | 0.81 | 58.0 | 3.67e-01 | 75.0% | 90.9% |
| None | — | 0.81 | 69.0 | 4.58e-01 | 97.2% | 24.3% | |
| 4323650 | 2004.1.1.45 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MutS_V | 0.73 | 60.0 | 3.88e-01 | 87.5% | 22.0% |
| 4037682 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.73 | 51.0 | 4.51e-01 | 72.2% | 53.0% |
| 4996292 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.72 | 48.0 | 4.26e-01 | 70.8% | 49.0% |
| 4027031 | 109.4.1.95 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 | 0.69 | 55.0 | 3.93e-01 | 88.9% | 28.4% |
| 3830835 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.67 | 61.0 | 5.19e-01 | 100.0% | 67.8% |
| 4076608 | 109.4.1.924 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_CcmH_CycH | 0.65 | 54.0 | 3.62e-01 | 95.8% | 24.1% |