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NC_054726.1__YP_010059613.1__KHQ86_gp162__00137

Bact-Vir

NC_054726.1__YP_010059613.1__KHQ86_gp162__00137

Identity

Accession:
NC_054726 ↗
Kingdom:
phage

Quality

70.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Stormageddonvirus› Gordonia_phage_Stormageddon

TaxID: 2656541

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 24-155
PDB
Domain cluster: representative
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4963446 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 25.0 3.36e-01 74.2% 93.8%
D2 medium residues 156-220
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4narA02 3.90.226.30 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › LarA, C-terminal domain 0.61 36.0 2.74e-01 70.8% 22.6%
3cr8C02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 37.0 2.76e-01 83.1% 59.6%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4257459 181.1.1.15 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › PF29197 0.73 46.0 4.96e-01 72.3% 76.4%
4406691 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.61 47.0 3.18e-01 89.2% 56.1%
3788578 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.56 39.0 3.58e-01 70.8% 94.1%
3933306 5001.1.1.44 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv 0.56 45.0 3.19e-01 93.8% 61.3%
3728038 7524.1.1.1 ↗ a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh 0.55 39.0 2.90e-01 76.9% 60.6%
3781860 2007.2.3.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase2 0.53 44.0 3.20e-01 92.3% 55.1%
5027504 102.2.1.0 ↗ alpha arrays › HhH/H2TH › H2TH › H2TH 0.51 37.0 3.44e-01 81.5% 67.8%