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NC_054727.1__YP_010059730.1__KHQ87_gp041__00041

Bact-Vir

NC_054727.1__YP_010059730.1__KHQ87_gp041__00041

Identity

Accession:
NC_054727 ↗
Kingdom:
phage

Quality

76.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Phrappuccinovirus› Mycobacterium_phage_Phrappuccino

TaxID: 2591223

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-95
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 59.0 5.24e-01 94.4% 62.1%
2kpjA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 59.0 5.93e-01 94.4% 91.4%
3u3wA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 59.0 5.98e-01 100.0% 95.7%
1y7yA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 56.0 5.73e-01 94.4% 91.3%
3b7hA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 63.0 6.16e-01 100.0% 92.1%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 58.0 5.95e-01 98.6% 98.5%
3zhiA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 57.0 5.73e-01 94.4% 100.0%
2awiA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 57.0 5.91e-01 100.0% 98.5%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 56.0 5.81e-01 94.4% 98.5%
3qf3D00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 57.0 4.76e-01 94.4% 60.9%
4jcyA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 57.0 5.28e-01 94.4% 72.8%
2ewtA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 56.0 5.61e-01 95.8% 93.0%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 58.0 5.40e-01 100.0% 77.8%
2ofyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 53.0 5.36e-01 94.4% 90.0%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 57.0 5.47e-01 100.0% 86.6%
3pxpA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 57.0 5.28e-01 100.0% 86.0%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 55.0 5.27e-01 100.0% 85.9%
2wusS00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 55.0 5.31e-01 100.0% 91.5%
5gp9A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 38.0 4.42e-01 90.1% 87.5%
2fd5A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 35.0 4.11e-01 87.3% 83.3%
3c2bA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.58 37.0 4.13e-01 90.1% 86.5%
4nqfA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.57 43.0 3.52e-01 84.5% 64.8%
3s6jE02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 38.0 3.91e-01 98.6% 73.9%
1g3nC01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.54 43.0 3.69e-01 88.7% 77.5%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3947329 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 61.0 6.33e-01 98.6% 98.5%
4380868 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 60.0 5.18e-01 95.8% 57.3%
3288109 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.72 59.0 5.97e-01 100.0% 92.9%
1181610 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 59.0 5.96e-01 100.0% 94.3%
2581392 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 59.0 5.94e-01 100.0% 93.0%
3588965 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 56.0 4.70e-01 95.8% 50.0%
4234863 101.1.4.17 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.71 60.0 5.98e-01 95.8% 92.0%
5030212 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 61.0 6.19e-01 98.6% 98.6%
428838 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.69 57.0 4.75e-01 94.4% 59.5%
2392399 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.69 56.0 5.64e-01 98.6% 91.5%
381796 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.67 57.0 4.69e-01 97.2% 51.9%
4675105 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.67 55.0 5.23e-01 100.0% 77.6%
2716468 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.67 54.0 5.07e-01 100.0% 73.3%
5053307 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 44.0 4.70e-01 93.0% 81.7%
3059487 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.65 57.0 5.39e-01 100.0% 82.6%
4172637 101.45.1.3 ↗ alpha arrays › HTH › DNA polymerase II large subunit DP2 helical domain › DNA polymerase II large subunit DP2 helical domain › PolC_DP2_central 0.63 55.0 5.15e-01 100.0% 84.4%
5071803 101.45.1.0 ↗ alpha arrays › HTH › DNA polymerase II large subunit DP2 helical domain › DNA polymerase II large subunit DP2 helical domain 0.63 51.0 4.85e-01 100.0% 76.5%
2767750 101.1.4.8 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Phage_CP76 0.63 51.0 4.90e-01 98.6% 77.4%
3942983 101.1.4.8 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Phage_CP76 0.62 51.0 4.04e-01 98.6% 43.3%
3287665 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.62 52.0 5.18e-01 100.0% 93.3%
4999897 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.61 53.0 5.23e-01 100.0% 97.3%
4004379 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.55 46.0 4.67e-01 100.0% 100.0%