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NC_054727.1__YP_010059887.1__KHQ87_gp198__00198

Bact-Vir

NC_054727.1__YP_010059887.1__KHQ87_gp198__00198

Identity

Accession:
NC_054727 ↗
Kingdom:
phage

Quality

84.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 13-84
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24202.2 best DUF7427 75.8 3.20e-21 100.0% 87.5%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5fmnA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.52 38.0 3.58e-01 77.8% 80.2%
7d1tA01 1.20.85.10 Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like 0.51 38.0 2.91e-01 91.7% 32.4%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.50 35.0 3.49e-01 73.6% 76.9%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3730592 2005.1.1.7 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d 0.63 43.0 2.90e-01 72.2% 27.9%
4953534 3826.1.1.1 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal 0.57 33.0 3.19e-01 70.8% 48.2%