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NC_054762.1__YP_010060226.1__KIJ60_gp56__00011
Bact-VirNC_054762.1__YP_010060226.1__KIJ60_gp56__00011
Identity
- Accession:
- NC_054762 ↗
- Kingdom:
- phage
Quality
79.0
mean pLDDT
Taxonomy
TaxID: 2793705
Cluster
View cluster (12 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-106
Domain cluster:
rep: MW712719.1__QWY79639.1__SEA_PERSISTENCE_9__00009__D7-104
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09355.16 best | Phage_Gp19 | 54.8 | 1.60e-14 | 93.1% | 87.0% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5oklA01 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.65 | 45.0 | 4.52e-01 | 85.1% | 71.3% |
| 3d2fA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.64 | 40.0 | 4.33e-01 | 88.1% | 75.0% |
| 6oi7A01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.60 | 46.0 | 3.72e-01 | 82.2% | 84.2% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.57 | 43.0 | 4.52e-01 | 100.0% | 92.0% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.57 | 36.0 | 3.87e-01 | 80.2% | 76.2% |
| 6oh6A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.54 | 43.0 | 3.06e-01 | 86.1% | 29.9% |
| 4l6rA02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.54 | 37.0 | 2.79e-01 | 73.3% | 85.6% |
| 2i53A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 42.0 | 4.14e-01 | 97.0% | 80.2% |
| 1x9fD00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 38.0 | 3.47e-01 | 78.2% | 87.9% |
| 1cscA01 | 1.10.580.10 | Mainly Alpha › Orthogonal Bundle › Citrate Synthase; domain 1 › Citrate Synthase, domain 1 | 0.51 | 38.0 | 2.75e-01 | 80.2% | 41.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4032613 | 4275.1.1.1 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Phage_connect_1 | 0.70 | 57.0 | 5.65e-01 | 100.0% | 83.8% |
| 3304969 | 3847.1.1.3 ↗ | alpha bundles › Hemagglutinin HA2 chain › Hemagglutinin HA2 chain › Hemagglutinin HA2 chain › RETICULATA-like | 0.63 | 50.0 | 3.90e-01 | 85.1% | 96.8% |
| 4378580 | 5000.4.1.1 ↗ | alpha arrays › Toxins' membrane translocation domains › delta-Endotoxin (insectocide), N-terminal domain › delta-Endotoxin (insectocide), N-terminal domain › Endotoxin_N | 0.53 | 41.0 | 3.21e-01 | 83.2% | 37.4% |
| 4628602 | 5000.4.1.1 ↗ | alpha arrays › Toxins' membrane translocation domains › delta-Endotoxin (insectocide), N-terminal domain › delta-Endotoxin (insectocide), N-terminal domain › Endotoxin_N | 0.53 | 41.0 | 3.04e-01 | 83.2% | 31.1% |
| 3968802 | 3831.1.1.1 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › LprI | 0.51 | 38.0 | 3.91e-01 | 91.1% | 82.7% |