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NC_054762.1__YP_010060238.1__KIJ60_gp44__00023

Bact-Vir

NC_054762.1__YP_010060238.1__KIJ60_gp44__00023

Identity

Accession:
NC_054762 ↗
Kingdom:
phage

Quality

75.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 39-106
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1av1A00 1.20.5.1230 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Apolipoprotein A-I 0.80 63.0 4.39e-01 83.8% 28.4%
1ik3A03 4.10.372.10 Few Secondary Structures › Irregular › Lipoxygenase-1; domain 3 › Lipoxygenase-1; Domain 3 0.54 29.0 2.65e-01 70.6% 34.8%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3739121 601.16.1.0 alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase 0.78 44.0 3.45e-01 92.6% 29.2%
3940399 150.1.1.24 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Prominin 0.75 68.0 4.49e-01 98.5% 65.6%
4022273 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.69 62.0 4.85e-01 100.0% 82.8%
3769571 1076.1.1.6 alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › DUF2053 0.68 50.0 3.46e-01 83.8% 23.7%
3784432 4336.2.1.1 alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 › EnY2 0.66 43.0 3.60e-01 83.8% 41.3%
3271281 148.1.1.0 alpha arrays › Histone-like › Histone-related › Histone 0.55 32.0 3.26e-01 70.6% 54.3%