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NC_054775.1__YP_010060718.1__KIP49_gp85__00006
Bact-VirNC_054775.1__YP_010060718.1__KIP49_gp85__00006
Identity
- Accession:
- NC_054775 ↗
- Kingdom:
- phage
Quality
87.7
mean pLDDT
Taxonomy
TaxID: 2517968
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 29-167
Domain cluster:
rep: RifSed_csp2_10ft_3_scaffold_6_prodigal-single.1__X__X__00069__D90-185_575-630
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13539.12 best | Peptidase_M15_4 | 29.9 | 8.80e-07 | 50.4% | 94.1% |
D2
high
residues 189-233
Domain cluster:
representative
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3266520 | 192.9.1.3 ↗ | alpha bundles › Long alpha-hairpin › Sporulation inhibitor Sda › Sporulation inhibitor Sda › DUF4326 | 0.53 | 39.0 | 3.83e-01 | 88.9% | 87.0% |
| 145432 | 170.2.1.2 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain › Gag_p30 | 0.52 | 40.0 | 3.09e-01 | 100.0% | 78.0% |