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NC_054784.1__YP_010061591.1__KIV59_gp25__00064
Bact-VirNC_054784.1__YP_010061591.1__KIV59_gp25__00064
Identity
- Accession:
- NC_054784 ↗
- Kingdom:
- phage
Quality
87.9
mean pLDDT
Taxonomy
TaxID: 2530140
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-57
Domain cluster:
rep: IMGVR_UViG_3300037809_000264-3300037809-Ga0427884_001405_75_272__D14-64
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10269.15 best | Tmemb_185A | 23.2 | 7.10e-05 | 78.2% | 13.9% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.81 | 51.0 | 4.22e-01 | 89.1% | 38.9% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 49.0 | 4.59e-01 | 90.9% | 56.1% |
| 6t0bc01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 49.0 | 4.35e-01 | 100.0% | 51.3% |
| 1vzsA01 | 1.10.246.110 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Mitochondrial ATP synthase-coupling factor 6 | 0.65 | 34.0 | 3.30e-01 | 92.7% | 42.9% |
| 3vkhB07 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 43.0 | 3.02e-01 | 96.4% | 23.3% |
| 2psmA00 | 1.20.1250.70 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 | 0.53 | 39.0 | 3.08e-01 | 80.0% | 53.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3355246 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.78 | 50.0 | 4.38e-01 | 90.9% | 45.0% |
| 4482084 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.70 | 51.0 | 4.24e-01 | 85.5% | 45.6% |
| 3592886 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.66 | 60.0 | 3.69e-01 | 100.0% | 86.9% |
| 3909150 | 5063.1.1.15 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › OCIA | 0.64 | 48.0 | 4.35e-01 | 100.0% | 58.7% |
| 3672513 | 206.1.1.74 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr | 0.59 | 44.0 | 2.66e-01 | 80.0% | 16.8% |
| 3304324 | 101.1.2.106 ↗ | alpha arrays › HTH › HTH › winged helix domain › Tam41_Mmp37 | 0.58 | 45.0 | 3.41e-01 | 85.5% | 94.1% |
| 3789131 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.56 | 51.0 | 2.88e-01 | 100.0% | 68.7% |
| 3660484 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.53 | 43.0 | 2.75e-01 | 98.2% | 44.2% |