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NC_054898.2__YP_010761435.1__KMB90_gp53__00053
Bact-VirNC_054898.2__YP_010761435.1__KMB90_gp53__00053
Identity
- Accession:
- NC_054898 ↗
- Kingdom:
- phage
Quality
83.4
mean pLDDT
Taxonomy
TaxID: 1480731
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-97
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 23.0 | 2.76e-01 | 95.6% | 47.6% |
| 2pkaA00 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 31.0 | 3.32e-01 | 97.8% | 56.2% |
| 1a87A01 | 3.30.1120.60 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Colicin | 0.59 | 41.0 | 4.04e-01 | 98.9% | 68.0% |
| 3apaA00 | 2.100.10.30 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain | 0.56 | 34.0 | 3.03e-01 | 100.0% | 40.6% |
| 3jamg01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 43.0 | 3.02e-01 | 93.4% | 94.8% |
| 1r8oB01 | 2.30.30.480 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 28.0 | 3.19e-01 | 100.0% | 72.7% |
| 2vseA04 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.50 | 35.0 | 3.11e-01 | 74.7% | 96.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929797 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.61 | 32.0 | 3.84e-01 | 83.5% | 76.3% |
| 3208578 | 76.1.1.7 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › DUF7600 | 0.54 | 35.0 | 3.21e-01 | 98.9% | 48.0% |
| 3580193 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 42.0 | 3.36e-01 | 90.1% | 70.7% |
| 4927382 | 11.9.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › FAH › FAH › FAA_hydrolase | 0.52 | 42.0 | 2.99e-01 | 90.1% | 84.8% |