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NC_054908.1__YP_010067592.1__KMC00_gp173__00173
Bact-VirNC_054908.1__YP_010067592.1__KMC00_gp173__00173
Identity
- Accession:
- NC_054908 ↗
- Kingdom:
- phage
Quality
79.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Tequatrovirus›
Escherichia_phage_vB_EcoM_DalCa
TaxID: 2420240
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-48
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4uqfG01 | 1.10.286.10 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain | 0.72 | 57.0 | 5.59e-01 | 100.0% | 82.7% |
| 2kr6A01 | 1.10.472.100 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Presenilin | 0.64 | 49.0 | 4.03e-01 | 100.0% | 41.5% |
| 5u1xA01 | 1.10.287.940 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel | 0.64 | 48.0 | 4.94e-01 | 100.0% | 91.3% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 46.0 | 3.08e-01 | 93.8% | 21.5% |
| 1lqsL01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.59 | 50.0 | 3.99e-01 | 97.9% | 59.0% |
| 3e7qA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 48.0 | 3.27e-01 | 100.0% | 56.7% |
| 4v19K02 | 1.10.10.250 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain | 0.52 | 40.0 | 3.55e-01 | 87.5% | 82.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3614319 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.60 | 44.0 | 4.06e-01 | 100.0% | 58.6% |
| 3893302 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.59 | 41.0 | 3.03e-01 | 75.0% | 34.3% |
| 3611122 | 130.1.1.32 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP_RNF34_RFFL (DEPRECATED) | 0.59 | 43.0 | 4.14e-01 | 93.8% | 67.3% |
| 1679631 | 142.1.1.8 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › PhyR_sigma2 | 0.56 | 40.0 | 3.62e-01 | 83.3% | 53.3% |
| 3690457 | 130.1.1.16 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Ish1 | 0.53 | 38.0 | 3.66e-01 | 91.7% | 65.0% |