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NC_054946.1__YP_010077724.1__KMC38_gp37__00037
Bact-VirNC_054946.1__YP_010077724.1__KMC38_gp37__00037
Identity
- Accession:
- NC_054946 ↗
- Kingdom:
- phage
Quality
84.5
mean pLDDT
Taxonomy
TaxID: 2759710
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-131
Domain cluster:
rep: OP882271.1__WAX22429.1__X__00084__D6-144
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1konA01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.77 | 28.0 | 3.80e-01 | 82.3% | 61.8% |
| 1aa7A02 | 1.10.10.180 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Influenza matrix protein M1, N-terminal subdomain 2 | 0.59 | 27.0 | 3.30e-01 | 72.6% | 65.4% |
| 1ku9A02 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.52 | 23.0 | 3.05e-01 | 80.6% | 78.1% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.51 | 28.0 | 3.66e-01 | 82.3% | 95.8% |
| 3ihuA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.50 | 40.0 | 3.93e-01 | 94.4% | 77.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3359672 | 3763.1.1.1 ↗ | alpha bundles › protein of unknown function NP_951600.1 helical domain › protein of unknown function NP_951600.1 helical domain › protein of unknown function NP_951600.1 helical domain › PRA1 | 0.57 | 32.0 | 3.94e-01 | 72.6% | 94.3% |
| 3719809 | 592.1.1.0 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain | 0.56 | 35.0 | 3.84e-01 | 87.9% | 76.0% |
| 3315111 | 4354.1.1.1 ↗ | a+b two layers › TRCF domain › TRCF domain › TRCF domain › TRCF | 0.52 | 43.0 | 3.96e-01 | 89.5% | 86.5% |
| 3568464 | 4144.2.1.4 ↗ | alpha duplicates or obligate multimers › YejL-like › D domain of Cdc4 and beta-TrCP › D domain of Cdc4 and beta-TrCP › DUF4508 | 0.50 | 28.0 | 3.36e-01 | 77.4% | 83.7% |