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NC_054946.1__YP_010077724.1__KMC38_gp37__00037

Bact-Vir

NC_054946.1__YP_010077724.1__KMC38_gp37__00037

Identity

Accession:
NC_054946 ↗
Kingdom:
phage

Quality

84.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-131
PDB
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1konA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.77 28.0 3.80e-01 82.3% 61.8%
1aa7A02 1.10.10.180 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Influenza matrix protein M1, N-terminal subdomain 2 0.59 27.0 3.30e-01 72.6% 65.4%
1ku9A02 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.52 23.0 3.05e-01 80.6% 78.1%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.51 28.0 3.66e-01 82.3% 95.8%
3ihuA02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.50 40.0 3.93e-01 94.4% 77.7%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3359672 3763.1.1.1 alpha bundles › protein of unknown function NP_951600.1 helical domain › protein of unknown function NP_951600.1 helical domain › protein of unknown function NP_951600.1 helical domain › PRA1 0.57 32.0 3.94e-01 72.6% 94.3%
3719809 592.1.1.0 alpha arrays › PWI domain-like › PWI domain › PWI domain 0.56 35.0 3.84e-01 87.9% 76.0%
3315111 4354.1.1.1 a+b two layers › TRCF domain › TRCF domain › TRCF domain › TRCF 0.52 43.0 3.96e-01 89.5% 86.5%
3568464 4144.2.1.4 alpha duplicates or obligate multimers › YejL-like › D domain of Cdc4 and beta-TrCP › D domain of Cdc4 and beta-TrCP › DUF4508 0.50 28.0 3.36e-01 77.4% 83.7%