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YP_010077990.1
Arc-VirNC_054953__YP_010077990.1__KMC41-gp45__00043
Identity
- Accession:
- NC_054953 ↗
- Protein ID:
- YP_010077990.1 ↗
- Kingdom:
- archaea
Quality
78.2
mean pLDDT
Taxonomy
TaxID: 2847105
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-130_155-228
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2d3aA02 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.64 | 59.0 | 5.48e-01 | 98.0% | 94.8% |
| 2kjwA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.63 | 27.0 | 3.73e-01 | 89.2% | 80.2% |
| 3ig5A02 | 3.30.590.50 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.60 | 56.0 | 4.58e-01 | 99.5% | 95.5% |
| 2qb7B02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.57 | 34.0 | 4.02e-01 | 95.6% | 85.0% |
| 2p92A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.56 | 26.0 | 3.60e-01 | 94.6% | 89.5% |
| 3a2bA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 29.0 | 3.47e-01 | 89.2% | 76.5% |
| 3f6tA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 33.0 | 3.79e-01 | 89.2% | 81.1% |
| 7ewsB02 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.54 | 49.0 | 4.59e-01 | 98.5% | 98.0% |
| 1mpyA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 33.0 | 3.74e-01 | 91.2% | 79.9% |
| 7x4lC02 | 3.90.1150.160 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.54 | 32.0 | 3.90e-01 | 90.7% | 92.2% |
| 6fh1B01 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.53 | 48.0 | 4.62e-01 | 97.5% | 97.0% |
| 4ctaA02 | 3.30.70.2860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 22.0 | 3.43e-01 | 82.8% | 100.0% |
| 1k8kD02 | 3.30.1460.20 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 32.0 | 3.89e-01 | 94.1% | 92.4% |
| 3wy7D01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 30.0 | 3.79e-01 | 92.6% | 93.3% |
| 2jgtA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 30.0 | 3.56e-01 | 92.6% | 81.6% |
| 6fyqA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 31.0 | 3.32e-01 | 91.2% | 68.2% |
| 1fc4A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 28.0 | 3.35e-01 | 91.7% | 79.4% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4238391 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.72 | 35.0 | 4.64e-01 | 98.5% | 83.5% |
| 4476945 | 321.1.1.1 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Gln-synt_C | 0.66 | 58.0 | 5.42e-01 | 93.6% | 93.2% |
| 3936148 | 321.1.1.1 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Gln-synt_C | 0.66 | 58.0 | 5.23e-01 | 94.6% | 85.4% |
| 4056215 | 321.1.1.1 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Gln-synt_C | 0.65 | 59.0 | 5.44e-01 | 95.6% | 93.3% |
| 3598338 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.65 | 58.0 | 5.25e-01 | 95.1% | 86.1% |
| 3937586 | 321.1.1.1 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Gln-synt_C | 0.64 | 59.0 | 5.25e-01 | 98.0% | 85.5% |
| 3379698 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.64 | 59.0 | 5.48e-01 | 99.0% | 95.7% |
| 5080869 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.63 | 27.0 | 4.12e-01 | 91.2% | 95.3% |
| 3317802 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.63 | 29.0 | 4.17e-01 | 97.5% | 93.7% |
| 3406890 | 304.120.1.9 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › MBTP1_N | 0.59 | 25.0 | 3.64e-01 | 77.5% | 86.7% |
| 5000991 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.58 | 37.0 | 4.57e-01 | 89.2% | 100.0% |
| 3164197 | 304.5.1.5 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › HisG_C | 0.58 | 21.0 | 3.29e-01 | 87.3% | 83.3% |
| 4026739 | 220.1.1.277 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF30698 | 0.57 | 22.0 | 2.82e-01 | 94.1% | 56.0% |
| 3477670 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.57 | 18.0 | 2.93e-01 | 98.0% | 75.4% |
| 4287508 | 241.1.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CesT | 0.56 | 36.0 | 4.30e-01 | 88.7% | 98.5% |
| 5058917 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.55 | 34.0 | 4.23e-01 | 87.7% | 99.2% |
| 3983446 | 101.1.2.84 ↗ | alpha arrays › HTH › HTH › winged helix domain › CaiF_GrlA | 0.54 | 20.0 | 2.83e-01 | 72.5% | 65.0% |
| 5027735 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.52 | 25.0 | 3.38e-01 | 94.6% | 88.0% |
| 4228937 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.52 | 27.0 | 3.63e-01 | 86.8% | 100.0% |
D2
medium
residues 131-154_229-318
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4p1mB01 | 3.30.160.880 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain | 0.55 | 19.0 | 3.00e-01 | 93.9% | 80.0% |