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NC_054955.1__YP_010078163.1__KMC43_gp39__00039
Bact-VirNC_054955.1__YP_010078163.1__KMC43_gp39__00039
Identity
- Accession:
- NC_054955 ↗
- Kingdom:
- phage
Quality
94.0
mean pLDDT
Taxonomy
TaxID: 2759715
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-147
Domain cluster:
rep: JN051154.1__AER59760.1__clP1_001__00001__D30-123
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xexB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 41.0 | 3.75e-01 | 91.3% | 49.1% |
| 4emyA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 35.0 | 3.14e-01 | 87.4% | 47.1% |
| 1hh5A00 | 3.90.10.10 | Alpha Beta › Alpha-Beta Complex › Cytochrome C3 › Cytochrome C3 | 0.54 | 28.0 | 3.58e-01 | 77.2% | 89.7% |
| 3wvoC02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.52 | 39.0 | 3.93e-01 | 80.3% | 96.9% |
| 3u1nB01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.51 | 44.0 | 3.32e-01 | 96.1% | 52.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3247408 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.62 | 39.0 | 2.69e-01 | 96.9% | 17.8% |
| 3672413 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 31.0 | 3.68e-01 | 93.7% | 70.0% |
| 4004443 | 4953.2.1.3 ↗ | beta barrels › L-aspartase C-terminal domain-like › Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain › Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain › NA37 | 0.56 | 35.0 | 3.72e-01 | 87.4% | 71.8% |
| 4056990 | 101.1.2.501 ↗ | alpha arrays › HTH › HTH › winged helix domain › NA37 | 0.55 | 34.0 | 3.66e-01 | 87.4% | 71.8% |
| 4116135 | 4009.1.1.11 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › NA37 | 0.54 | 34.0 | 3.59e-01 | 87.4% | 68.7% |
| 4236657 | 633.21.1.18 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CASP_dom | 0.54 | 43.0 | 4.03e-01 | 84.3% | 87.7% |
| 3634661 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.53 | 34.0 | 3.96e-01 | 89.8% | 96.5% |
| 5016606 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 27.0 | 2.68e-01 | 88.2% | 43.6% |
| 4090678 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.52 | 38.0 | 3.24e-01 | 77.2% | 49.3% |
| 4977168 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 24.0 | 2.88e-01 | 77.2% | 63.6% |
| 3985490 | 192.2.1.5 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › DUF4376 | 0.51 | 38.0 | 3.85e-01 | 100.0% | 80.6% |