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NC_054959.1__YP_010078450.1__KMC47_gp66__00055
Bact-VirNC_054959.1__YP_010078450.1__KMC47_gp66__00055
Identity
- Accession:
- NC_054959 ↗
- Kingdom:
- phage
Quality
78.3
mean pLDDT
Taxonomy
TaxID: 2759727
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-61
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a1iA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.58 | 33.0 | 3.76e-01 | 84.6% | 90.0% |
| 2gu0A01 | 3.90.1400.10 | Alpha Beta › Alpha-Beta Complex › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain | 0.55 | 42.0 | 3.16e-01 | 84.6% | 58.5% |
| 4evxA00 | 1.10.1740.240 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.51 | 40.0 | 3.42e-01 | 94.2% | 91.8% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3717023 | 105.2.1.60 ↗ | alpha duplicates or obligate multimers › HLH-like › Dimerization domain in LRIM1/APL1C › Dimerization domain in LRIM1/APL1C › CCDC113_CCDC96_CC | 0.64 | 45.0 | 3.16e-01 | 75.0% | 27.6% |
| 4277444 | 2484.1.1.97 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas9_RuvC | 0.58 | 48.0 | 3.07e-01 | 96.2% | 41.4% |
| 5077887 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.54 | 42.0 | 2.90e-01 | 90.4% | 95.8% |