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NC_054959.1__YP_010078450.1__KMC47_gp66__00055

Bact-Vir

NC_054959.1__YP_010078450.1__KMC47_gp66__00055

Identity

Accession:
NC_054959 ↗
Kingdom:
phage

Quality

78.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-61
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a1iA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.58 33.0 3.76e-01 84.6% 90.0%
2gu0A01 3.90.1400.10 Alpha Beta › Alpha-Beta Complex › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain 0.55 42.0 3.16e-01 84.6% 58.5%
4evxA00 1.10.1740.240 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › 0.51 40.0 3.42e-01 94.2% 91.8%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3717023 105.2.1.60 alpha duplicates or obligate multimers › HLH-like › Dimerization domain in LRIM1/APL1C › Dimerization domain in LRIM1/APL1C › CCDC113_CCDC96_CC 0.64 45.0 3.16e-01 75.0% 27.6%
4277444 2484.1.1.97 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas9_RuvC 0.58 48.0 3.07e-01 96.2% 41.4%
5077887 304.139.1.2 a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs 0.54 42.0 2.90e-01 90.4% 95.8%