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NC_054960.1__YP_010078504.1__KMC48_gp56__00033

Bact-Vir

NC_054960.1__YP_010078504.1__KMC48_gp56__00033

Identity

Accession:
NC_054960 ↗
Kingdom:
phage

Quality

87.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-137
PDB
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kvpA00 6.20.140.10 Special › Other non-globular › Immunoglobulin-like › 0.68 26.0 4.16e-01 73.0% 100.0%
3g5oC00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.52 28.0 3.39e-01 83.3% 78.2%
2x9aA00 2.30.27.10 Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain 0.51 24.0 3.18e-01 79.4% 86.9%
3w0fA01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.50 31.0 3.18e-01 77.0% 63.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3840630 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.63 30.0 2.23e-01 81.0% 17.5%
3591253 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 32.0 2.26e-01 89.7% 18.9%
4968449 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.55 25.0 3.42e-01 77.8% 83.1%
3580190 59.1.1.0 beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like 0.50 30.0 3.38e-01 76.2% 77.9%
D2 high residues 191-259
PDB