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NC_054960.1__YP_010078504.1__KMC48_gp56__00033
Bact-VirNC_054960.1__YP_010078504.1__KMC48_gp56__00033
Identity
- Accession:
- NC_054960 ↗
- Kingdom:
- phage
Quality
87.7
mean pLDDT
Taxonomy
TaxID: 2759730
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-137
Domain cluster:
rep: GQ357915.1__ACV50218.1__X__00195__D2-144
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kvpA00 | 6.20.140.10 | Special › Other non-globular › Immunoglobulin-like › | 0.68 | 26.0 | 4.16e-01 | 73.0% | 100.0% |
| 3g5oC00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.52 | 28.0 | 3.39e-01 | 83.3% | 78.2% |
| 2x9aA00 | 2.30.27.10 | Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain | 0.51 | 24.0 | 3.18e-01 | 79.4% | 86.9% |
| 3w0fA01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.50 | 31.0 | 3.18e-01 | 77.0% | 63.0% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3840630 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.63 | 30.0 | 2.23e-01 | 81.0% | 17.5% |
| 3591253 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 32.0 | 2.26e-01 | 89.7% | 18.9% |
| 4968449 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.55 | 25.0 | 3.42e-01 | 77.8% | 83.1% |
| 3580190 | 59.1.1.0 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like | 0.50 | 30.0 | 3.38e-01 | 76.2% | 77.9% |
D2
high
residues 191-259
Domain cluster:
rep: NC_054946.1__YP_010077695.1__KMC38_gp08__00008__D139-206