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NC_054980.1__YP_010079905.1__KMC68_gp13__00013

Bact-Vir

NC_054980.1__YP_010079905.1__KMC68_gp13__00013

Identity

Accession:
NC_054980 ↗
Kingdom:
phage

Quality

91.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Phietavirus› Staphylococcus_phage_Henu2

TaxID: 2492948

Cluster

View cluster (12 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-70
PDB
Domain cluster: representative
CATH (86)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5l3wA01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.77 54.0 5.12e-01 74.3% 73.8%
1ng6A02 1.10.10.410 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.76 44.0 4.80e-01 98.6% 70.2%
3nz4B03 1.10.274.20 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 0.75 66.0 5.81e-01 100.0% 94.2%
1t6jA03 1.10.274.20 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 0.75 66.0 5.85e-01 100.0% 89.3%
3lcnB00 1.10.340.40 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain 0.73 65.0 5.86e-01 100.0% 79.4%
1ornA01 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.71 61.0 5.23e-01 95.7% 67.9%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 46.0 4.77e-01 90.0% 71.9%
2lyiA01 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.71 60.0 4.76e-01 95.7% 70.9%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 46.0 4.85e-01 87.1% 77.0%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 49.0 5.06e-01 84.3% 80.0%
1eyqA02 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.68 55.0 4.29e-01 90.0% 55.3%
2hs5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 50.0 5.11e-01 82.9% 80.6%
4yosA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.67 56.0 4.38e-01 95.7% 54.4%
2hr3D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 44.0 4.60e-01 90.0% 75.8%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 56.0 4.97e-01 94.3% 80.6%
1f5qB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 57.0 4.93e-01 95.7% 72.5%
1c9bA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 54.0 4.91e-01 91.4% 80.4%
1on2A02 1.10.60.10 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain 0.66 40.0 4.17e-01 88.6% 66.7%
3r4kB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 44.0 4.58e-01 90.0% 76.2%
3a06B03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.66 47.0 4.36e-01 75.7% 81.8%
3tqnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 4.89e-01 84.3% 76.7%
5xs2B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 56.0 4.58e-01 97.1% 66.7%
1aisB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 53.0 4.75e-01 91.4% 78.8%
4b8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 3.74e-01 95.7% 38.6%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 49.0 4.79e-01 100.0% 74.4%
4h0eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 48.0 4.86e-01 84.3% 80.0%
1w98B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.64 54.0 4.64e-01 94.3% 69.3%
3edpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 46.0 4.56e-01 84.3% 71.1%
7jv7B01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.64 54.0 4.32e-01 95.7% 54.1%
3bwgB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 4.73e-01 81.4% 78.3%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 42.0 4.30e-01 90.0% 71.2%
2k9lA00 1.10.10.1330 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain 0.64 52.0 5.12e-01 98.6% 85.5%
1dcnA03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.64 52.0 5.24e-01 95.7% 91.7%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 44.0 4.49e-01 88.6% 74.6%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 43.0 4.19e-01 91.4% 61.7%
5y6iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 42.0 4.14e-01 90.0% 64.4%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 40.0 4.70e-01 88.6% 93.8%
1j5yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 43.0 4.51e-01 88.6% 78.1%
4tv7D01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 48.0 4.47e-01 84.3% 65.9%
3eetA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 47.0 4.88e-01 84.3% 86.2%
2h09A02 1.10.60.10 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain 0.63 40.0 4.36e-01 95.7% 80.4%
4m0mA03 1.20.1270.430 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.63 45.0 4.41e-01 77.1% 87.3%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 44.0 4.39e-01 84.3% 70.7%
1zp2A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.63 53.0 4.60e-01 95.7% 73.2%
3gwzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 4.04e-01 91.4% 57.3%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 44.0 3.55e-01 98.6% 38.0%
2pmiB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.62 47.0 3.40e-01 82.9% 49.8%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 47.0 4.39e-01 95.7% 65.5%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 46.0 4.54e-01 84.3% 74.7%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 46.0 4.29e-01 94.3% 64.0%
2di3A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 46.0 4.50e-01 82.9% 74.7%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 45.0 3.69e-01 100.0% 41.9%
1pk1B00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.61 51.0 5.18e-01 100.0% 98.6%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 4.29e-01 90.0% 69.2%
3lstA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 42.0 3.95e-01 91.4% 58.1%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 46.0 4.37e-01 94.3% 67.1%
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 4.57e-01 74.3% 93.2%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.61 46.0 4.72e-01 94.3% 88.1%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 44.0 4.29e-01 88.6% 70.0%
2g8lB01 1.10.8.380 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 0.60 44.0 4.51e-01 80.0% 95.5%
3ilkA02 1.10.8.590 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.59 42.0 4.28e-01 94.3% 77.9%
4gouA01 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.59 40.0 3.13e-01 70.0% 33.8%
5c17A00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.59 46.0 3.35e-01 100.0% 29.6%
3iwfB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 50.0 4.71e-01 100.0% 77.5%
4ivnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 49.0 4.84e-01 98.6% 89.5%
2nriB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 47.0 4.34e-01 100.0% 69.6%
2b5dX01 3.20.110.10 Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain 0.58 42.0 2.65e-01 78.6% 68.6%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 4.31e-01 88.6% 71.4%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 44.0 4.13e-01 100.0% 66.3%
4krdB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.57 49.0 3.65e-01 98.6% 48.4%
4ragA02 1.10.10.430 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphatase 2C, C-terminal domain suprefamily 0.57 39.0 3.94e-01 71.4% 91.2%
4s3mB02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.57 48.0 4.16e-01 92.9% 89.6%
2g8lA02 1.10.285.20 Mainly Alpha › Orthogonal Bundle › Glutamate Dehydrogenase; Chain A, domain 3 › Uncharacterised protein PF01937, DUF89, domain 2 0.57 39.0 4.06e-01 72.9% 89.2%
1k87A02 1.10.2060.10 Mainly Alpha › Orthogonal Bundle › PutA proline dehydrogenase (PRODH), domain 2 › PutA proline dehydrogenase (PRODH), domain 2 0.57 45.0 3.97e-01 90.0% 89.9%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.57 42.0 4.25e-01 81.4% 83.8%
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 43.0 4.18e-01 88.6% 72.8%
2o3fA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 46.0 4.49e-01 97.1% 82.9%
1g3nC01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.55 46.0 3.92e-01 100.0% 55.0%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 49.0 3.97e-01 100.0% 78.4%
6oinA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 4.22e-01 85.7% 83.6%
4nqiD00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.54 40.0 2.86e-01 80.0% 74.6%
5jazA03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.54 39.0 3.62e-01 77.1% 85.7%
7p5hB03 1.20.1440.230 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain 0.53 42.0 3.99e-01 92.9% 92.1%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 46.0 3.37e-01 100.0% 71.7%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 47.0 3.66e-01 100.0% 76.2%
7p2yC03 1.20.150.20 Mainly Alpha › Up-down Bundle › Lysin › ATP synthase alpha/beta chain, C-terminal domain 0.52 43.0 3.53e-01 95.7% 49.6%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5058464 186.1.1.4 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.71 58.0 5.60e-01 90.0% 91.3%
5032049 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 46.0 4.89e-01 81.4% 80.0%
3279148 101.1.2.6 ↗ alpha arrays › HTH › HTH › winged helix domain › GntR 0.67 50.0 4.79e-01 80.0% 68.8%
4011337 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.67 48.0 4.52e-01 75.7% 70.6%
5064398 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.67 56.0 5.01e-01 94.3% 80.0%
5048146 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 43.0 4.85e-01 87.1% 92.0%
4402403 101.1.2.92 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.66 45.0 4.50e-01 70.0% 74.3%
2754206 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.66 55.0 4.91e-01 94.3% 78.6%
5057571 101.1.2.554 ↗ alpha arrays › HTH › HTH › winged helix domain › PF30184 0.66 48.0 4.42e-01 77.1% 61.1%
4125985 102.1.1.27 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.66 56.0 5.70e-01 95.7% 100.0%
5040184 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 48.0 4.61e-01 84.3% 68.8%
3787521 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.65 54.0 4.10e-01 91.4% 46.7%
4947744 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.65 51.0 5.35e-01 85.7% 100.0%
3978748 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.65 44.0 4.16e-01 84.3% 57.6%
3805676 1128.1.1.13 ↗ alpha bundles › LYR protein › LYR protein › LYR protein › PF30094 0.65 46.0 4.29e-01 75.7% 86.7%
3981636 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 44.0 4.24e-01 87.1% 61.3%
4938496 103.17.1.0 ↗ alpha arrays › RuvA-C › HMG-CoA reductase flap domain › HMG-CoA reductase flap domain 0.64 45.0 4.94e-01 74.3% 92.7%
3943615 101.1.2.6 ↗ alpha arrays › HTH › HTH › winged helix domain › GntR 0.64 47.0 4.47e-01 78.6% 68.2%
3204144 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.64 52.0 4.28e-01 90.0% 59.2%
3279667 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.64 43.0 4.41e-01 84.3% 73.8%
5019927 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 55.0 4.97e-01 100.0% 100.0%
4574776 101.1.2.6 ↗ alpha arrays › HTH › HTH › winged helix domain › GntR 0.63 47.0 4.50e-01 82.9% 68.8%
3281935 101.1.2.6 ↗ alpha arrays › HTH › HTH › winged helix domain › GntR 0.63 48.0 4.69e-01 80.0% 74.7%
4467359 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.63 52.0 4.03e-01 100.0% 38.8%
4241167 375.1.1.179 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.63 53.0 4.12e-01 98.6% 53.5%
3190824 166.1.1.0 ↗ alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C 0.63 45.0 4.45e-01 75.7% 97.3%
4398165 166.1.1.1 ↗ alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C 0.63 46.0 3.93e-01 77.1% 64.5%
3964030 101.1.2.6 ↗ alpha arrays › HTH › HTH › winged helix domain › GntR 0.63 51.0 4.97e-01 94.3% 81.3%
4940480 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.63 43.0 4.73e-01 88.6% 90.9%
1276701 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.63 53.0 4.39e-01 95.7% 63.1%
4383658 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.62 42.0 4.17e-01 85.7% 65.3%
3729348 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.62 47.0 3.65e-01 84.3% 62.9%
4031479 101.1.2.231 ↗ alpha arrays › HTH › HTH › winged helix domain › Staph_reg_Sar_Rot 0.62 44.0 3.79e-01 94.3% 46.1%
3701576 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.62 46.0 3.64e-01 84.3% 64.2%
3972373 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.61 53.0 4.06e-01 100.0% 45.7%
3969964 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.61 41.0 3.90e-01 88.6% 57.6%
4992785 101.1.2.222 ↗ alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N 0.61 53.0 4.67e-01 100.0% 67.6%
4020945 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.60 46.0 4.59e-01 82.9% 85.3%
3254469 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.60 47.0 3.60e-01 88.6% 62.8%
3989015 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 48.0 4.20e-01 100.0% 58.1%
3604402 101.1.2.554 ↗ alpha arrays › HTH › HTH › winged helix domain › PF30184 0.60 46.0 4.25e-01 88.6% 63.2%
4943786 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 43.0 4.37e-01 82.9% 77.1%
5070580 181.1.1.0 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.60 45.0 4.77e-01 81.4% 100.0%
4573573 166.1.1.1 ↗ alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C 0.60 40.0 3.82e-01 71.4% 80.0%
3640213 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.60 50.0 3.81e-01 98.6% 45.9%
3788683 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.60 46.0 3.30e-01 87.1% 45.9%
4954772 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.60 42.0 4.55e-01 88.6% 94.5%
5048188 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 47.0 3.60e-01 100.0% 37.5%
5031872 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 43.0 4.56e-01 80.0% 90.0%
4013315 148.1.3.216 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF7069 0.59 46.0 4.07e-01 82.9% 76.0%
3735597 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.59 48.0 4.51e-01 88.6% 89.4%
5041454 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 44.0 4.31e-01 92.9% 73.8%
5000181 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.59 48.0 4.24e-01 94.3% 73.6%
5042406 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.58 50.0 4.62e-01 100.0% 92.6%
3424337 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.58 50.0 4.84e-01 100.0% 90.0%
4395674 101.1.2.92 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.58 41.0 3.93e-01 85.7% 62.4%
3253586 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.58 47.0 3.86e-01 94.3% 77.9%
4014053 148.1.3.216 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF7069 0.58 50.0 4.76e-01 94.3% 91.3%
136408 101.1.1.11 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 0.58 49.0 4.64e-01 100.0% 77.5%
3986364 101.1.1.11 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 0.58 49.0 4.56e-01 98.6% 75.6%
3328518 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.57 48.0 3.64e-01 97.1% 81.6%
5083026 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 42.0 3.67e-01 81.4% 50.0%
3173665 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.57 50.0 3.94e-01 100.0% 51.3%
3988793 101.1.2.93 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_Mga 0.57 40.0 3.79e-01 84.3% 58.9%
3263033 601.1.2.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.57 47.0 4.20e-01 100.0% 100.0%
5064400 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.57 49.0 4.52e-01 100.0% 77.9%
4098142 101.1.2.55 ↗ alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.57 41.0 4.02e-01 84.3% 68.8%
3948446 101.1.1.11 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 0.57 48.0 4.73e-01 98.6% 90.7%
3979850 101.1.1.11 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 0.56 48.0 4.56e-01 100.0% 81.2%
4961655 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.56 48.0 4.39e-01 97.1% 71.6%
5023608 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.56 49.0 4.04e-01 100.0% 79.2%
3587898 101.1.2.214 ↗ alpha arrays › HTH › HTH › winged helix domain › DnaD_N 0.56 45.0 3.80e-01 100.0% 51.7%
4943136 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.56 49.0 4.52e-01 100.0% 78.9%
5027863 101.1.2.55 ↗ alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.56 41.0 3.99e-01 85.7% 70.0%
3597468 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.55 46.0 3.57e-01 97.1% 47.1%
3632146 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.55 45.0 3.54e-01 95.7% 73.5%
4518856 101.1.1.11 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 0.54 45.0 4.44e-01 97.1% 89.3%
3716640 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.54 46.0 3.48e-01 100.0% 91.6%
3600385 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.54 46.0 3.36e-01 100.0% 89.5%
4109098 166.1.1.1 ↗ alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C 0.54 38.0 3.54e-01 77.1% 75.5%
4014826 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.53 45.0 3.42e-01 100.0% 45.3%
3718570 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.53 45.0 3.82e-01 100.0% 57.6%
60261 166.1.1.0 ↗ alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C 0.52 38.0 3.48e-01 78.6% 74.7%
4013286 101.1.3.9 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Myb_DNA-bind_8 0.52 37.0 3.94e-01 98.6% 100.0%
4048455 166.1.1.1 ↗ alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C 0.51 36.0 3.39e-01 78.6% 71.6%
4682059 166.1.1.1 ↗ alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C 0.51 36.0 3.39e-01 78.6% 74.2%
D2 high residues 72-119
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1d2oA02 2.60.40.1140 Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain 0.63 45.0 3.84e-01 97.9% 46.3%
7pjjA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 48.0 3.69e-01 97.9% 53.1%
3ddcB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.59 44.0 3.41e-01 89.6% 80.5%
7zj3D01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.58 41.0 3.54e-01 77.1% 53.1%
1pqzA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 41.0 3.44e-01 87.5% 88.1%
5yxkA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 40.0 3.24e-01 81.2% 89.1%
6zgqA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.55 44.0 3.35e-01 100.0% 46.3%
5k6wA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 3.63e-01 97.9% 48.8%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.55 45.0 3.32e-01 97.9% 37.5%
5exvC00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.54 37.0 2.61e-01 72.9% 70.3%
2orzA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 43.0 3.11e-01 93.8% 98.1%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 45.0 4.43e-01 93.8% 98.0%
5t89Y06 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 37.0 3.17e-01 79.2% 89.1%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 45.0 4.43e-01 95.8% 94.1%
2ww8A05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 41.0 3.20e-01 93.8% 93.5%
1wlfA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.52 42.0 3.63e-01 97.9% 65.5%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.52 42.0 4.25e-01 93.8% 100.0%
4cc2A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 44.0 4.07e-01 100.0% 100.0%
4lhsA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 39.0 2.93e-01 100.0% 30.9%
3pvlA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 37.0 3.41e-01 89.6% 78.9%
3qfgA00 2.60.40.1240 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 39.0 3.01e-01 100.0% 78.6%
3ci0J02 2.10.70.20 Mainly Beta › Ribbon › Complement Module; domain 1 › gspk-gspi-gspj complex like domains 0.50 35.0 3.54e-01 100.0% 74.0%
4lplA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 41.0 3.08e-01 100.0% 38.0%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3719787 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 48.0 5.00e-01 85.4% 100.0%
4979347 375.1.3.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 0.62 47.0 4.31e-01 91.7% 61.4%
3284102 375.1.1.185 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_8 0.61 45.0 4.47e-01 83.3% 86.0%
4028456 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 45.0 4.67e-01 81.2% 86.7%
4970821 375.1.3.1 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 0.59 46.0 4.23e-01 97.9% 65.7%
5078006 375.1.3.1 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 0.58 47.0 4.28e-01 97.9% 67.1%
4945327 375.1.3.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 0.58 46.0 4.18e-01 93.8% 65.7%
4513244 11.1.1.846 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Peptidase_M35 0.58 45.0 3.32e-01 91.7% 92.4%
4947213 375.1.3.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 0.57 45.0 4.37e-01 93.8% 81.8%
5030549 375.1.3.1 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 0.57 47.0 4.54e-01 93.8% 81.8%
5075187 375.1.3.1 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 0.57 44.0 4.19e-01 93.8% 73.3%
3538506 375.1.1.217 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF26040 0.57 38.0 3.78e-01 70.8% 76.0%
4930518 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 40.0 3.17e-01 79.2% 87.0%
3846046 221.1.1.195 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › VCIP135_N 0.55 44.0 4.15e-01 100.0% 75.4%
4947644 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 45.0 4.26e-01 97.9% 76.7%
4963432 4076.2.1.7 ↗ a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › DUF5817 0.55 44.0 3.81e-01 97.9% 89.4%
151096 4050.1.1.2 ↗ few secondary structure elements › beta-barrel domain in Capz › beta-barrel domain in Capz › beta-barrel domain in Capz › F-actin_cap_A 0.55 40.0 4.02e-01 79.2% 91.8%
5054738 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 48.0 4.66e-01 100.0% 89.1%
3926623 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.54 43.0 3.94e-01 100.0% 80.8%
3797486 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 42.0 3.90e-01 91.7% 69.2%
3300479 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.53 37.0 3.07e-01 85.4% 84.3%
3921681 11.1.1.178 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 0.52 43.0 3.08e-01 97.9% 37.5%
5049075 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.51 36.0 2.59e-01 81.2% 67.2%
4180988 1119.1.1.1 ↗ a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW 0.51 42.0 2.74e-01 100.0% 54.9%
3277720 375.1.1.185 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_8 0.50 35.0 3.62e-01 83.3% 97.5%
3274359 11.1.1.12 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin 0.50 35.0 2.37e-01 81.2% 25.2%