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NC_054982.1__YP_010080039.1__KMC70_gp18__00018
Bact-VirNC_054982.1__YP_010080039.1__KMC70_gp18__00018
Identity
- Accession:
- NC_054982 ↗
- Kingdom:
- phage
Quality
76.4
mean pLDDT
Taxonomy
TaxID: 2557555
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-115
Domain cluster:
rep: MH321492.1__AXC42906.1__Lorac_015__00014__D2-102
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12363.15 best | Phage_TAC_12 | 31.9 | 2.20e-07 | 100.0% | 86.5% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lewA01 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 40.0 | 2.82e-01 | 70.1% | 45.7% |
| 2w96A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 36.0 | 3.55e-01 | 82.2% | 59.3% |
| 1pg2A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.56 | 45.0 | 3.17e-01 | 86.9% | 87.2% |
| 1kg1A02 | 2.30.30.460 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 19.0 | 3.22e-01 | 80.4% | 100.0% |
| 4iejA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.52 | 31.0 | 3.54e-01 | 85.0% | 81.3% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.52 | 37.0 | 3.86e-01 | 84.1% | 79.0% |
| 1vyiA00 | 1.20.120.820 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Phosphoprotein, C-terminal domain | 0.51 | 37.0 | 3.71e-01 | 87.9% | 74.8% |
| 3u8vA00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.50 | 36.0 | 4.02e-01 | 83.2% | 97.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4983508 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 30.0 | 3.76e-01 | 86.0% | 65.7% |
| 3223228 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 45.0 | 3.17e-01 | 89.7% | 23.9% |
| 5083383 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 31.0 | 4.03e-01 | 91.6% | 96.7% |
| 5071720 | 242.2.1.1 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like › DUF61 | 0.55 | 25.0 | 3.51e-01 | 83.2% | 92.0% |
| 3725080 | 220.1.1.34 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_9 | 0.54 | 39.0 | 2.94e-01 | 73.8% | 88.1% |
| 3200023 | 5050.1.1.2 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › PTR2 | 0.53 | 45.0 | 2.96e-01 | 97.2% | 83.7% |
| 3997947 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.52 | 26.0 | 3.52e-01 | 75.7% | 100.0% |
| 1108072 | 3762.1.1.1 ↗ | alpha arrays › Poly(ADP-ribose) glycohydrolase helical domain › Poly(ADP-ribose) glycohydrolase helical domain › Poly(ADP-ribose) glycohydrolase helical domain › PARG_cat_N | 0.51 | 39.0 | 3.01e-01 | 84.1% | 36.3% |
| 5075529 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.50 | 39.0 | 3.74e-01 | 84.1% | 89.9% |
D2
high
residues 123-218
D3
medium
residues 219-280
Domain cluster:
rep: MZ041098.1__QWT56469.1__DSP07_02__00002__D1-48