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NC_054985.1__YP_010080228.1__KMC73_gp07__00007
Bact-VirNC_054985.1__YP_010080228.1__KMC73_gp07__00007
Identity
- Accession:
- NC_054985 ↗
- Kingdom:
- phage
Quality
83.3
mean pLDDT
Taxonomy
TaxID: 2249779
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 6-36
Domain cluster:
representative
D2
medium
residues 47-76
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4cs9C00 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.79 | 62.0 | 3.87e-01 | 93.3% | 21.8% |
| 2j6aA00 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.72 | 58.0 | 3.84e-01 | 100.0% | 73.5% |
| 4kigA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.70 | 53.0 | 3.27e-01 | 83.3% | 24.7% |
| 3zqsA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.70 | 50.0 | 3.57e-01 | 76.7% | 25.0% |
| 2hngA00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.59 | 49.0 | 3.23e-01 | 96.7% | 63.2% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3793186 | 6159.1.1.0 ↗ | extended segments › Nup54 C-terminal interacting domain › Nup54 C-terminal interacting domain › Nup54 C-terminal interacting domain | 0.77 | 64.0 | 4.40e-01 | 96.7% | 30.5% |
| 5796 | 504.1.1.2 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › DUF1149 | 0.72 | 52.0 | 3.47e-01 | 80.0% | 85.5% |