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NC_054987.1__YP_010080356.1__KMC75_gp23__00023
Bact-VirNC_054987.1__YP_010080356.1__KMC75_gp23__00023
Identity
- Accession:
- NC_054987 ↗
- Kingdom:
- phage
Quality
93.7
mean pLDDT
Taxonomy
TaxID: 2662299
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-123
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xzmO02 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.65 | 38.0 | 4.73e-01 | 79.5% | 100.0% |
| 2ob9A00 | 3.30.2220.20 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › Phage tail assembly chaperone gp13-like | 0.63 | 45.0 | 4.79e-01 | 100.0% | 85.0% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 37.0 | 4.42e-01 | 78.7% | 92.1% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 33.0 | 3.83e-01 | 78.7% | 79.8% |
| 3hwcA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.56 | 39.0 | 3.33e-01 | 72.1% | 65.7% |
| 2wyhB04 | 1.20.1270.50 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain | 0.56 | 35.0 | 3.79e-01 | 81.1% | 74.3% |
| 2llwA00 | 1.10.260.100 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › | 0.55 | 31.0 | 3.90e-01 | 77.0% | 93.0% |
| 3k6jA02 | 1.10.1040.50 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › | 0.55 | 34.0 | 2.86e-01 | 80.3% | 35.6% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.55 | 37.0 | 4.05e-01 | 77.0% | 82.4% |
| 3pyoY00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 27.0 | 3.63e-01 | 97.5% | 93.5% |
| 3kluA01 | 3.30.2220.30 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › | 0.52 | 41.0 | 4.28e-01 | 100.0% | 92.7% |
| 1kblA05 | 1.20.80.30 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.52 | 27.0 | 3.09e-01 | 86.9% | 65.2% |
| 2e2dC02 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 30.0 | 3.37e-01 | 92.6% | 76.6% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3939421 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.60 | 46.0 | 3.36e-01 | 82.0% | 38.5% |
| 3486361 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.58 | 44.0 | 3.53e-01 | 81.1% | 49.4% |
| 3946198 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.58 | 34.0 | 4.05e-01 | 77.9% | 83.5% |
| 3963155 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.57 | 31.0 | 3.77e-01 | 75.4% | 84.0% |
| 3923267 | 5001.1.1.44 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv | 0.56 | 42.0 | 3.24e-01 | 80.3% | 82.7% |
| 3923219 | 5001.1.1.44 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv | 0.55 | 42.0 | 3.16e-01 | 80.3% | 72.4% |
| 3509926 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.55 | 48.0 | 3.70e-01 | 96.7% | 54.1% |
| 3634928 | 5069.1.1.40 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Far-17a_AIG1 | 0.55 | 39.0 | 3.18e-01 | 73.0% | 84.2% |
| 3934845 | 5001.1.1.66 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg | 0.54 | 40.0 | 3.10e-01 | 78.7% | 82.1% |
| 3826771 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.54 | 31.0 | 3.12e-01 | 80.3% | 54.4% |
| 3470317 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.54 | 40.0 | 3.02e-01 | 77.9% | 40.0% |
| 3932516 | 5001.1.1.44 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv | 0.53 | 40.0 | 3.05e-01 | 79.5% | 78.3% |
| 3937021 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.53 | 40.0 | 3.07e-01 | 81.1% | 40.3% |
| 1884208 | 3444.1.1.2 ↗ | alpha arrays › DP domain › DP domain › DP domain › ZNHIT3_C | 0.52 | 31.0 | 3.81e-01 | 86.9% | 96.0% |
| 3283574 | 150.8.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › PPE | 0.52 | 36.0 | 3.00e-01 | 71.3% | 93.8% |
| 3353909 | 3619.1.1.3 ↗ | alpha arrays › Nucleoporin NUP120 helical domain › Nucleoporin NUP120 helical domain › Nucleoporin NUP120 helical domain › DUF5311 | 0.50 | 39.0 | 2.96e-01 | 82.8% | 79.7% |
| 3805839 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.50 | 30.0 | 3.47e-01 | 80.3% | 84.7% |