←Back to structures

NC_055034.1__YP_010082710.1__KMD23_gp02__00002

Bact-Vir

Identity

Accession:: NC_055034 ↗
Kingdom:: phage

Quality

76.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Laroyevirus› Arthrobacter_phage_Wheelbite

TaxID: 2015873

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 345-395

PDB

D2 medium residues 1-96_204-269_330-344

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02195.27 best	ParB_N	32.5	1.10e-07	50.3%	86.4%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1vk1A01	3.90.1530.10	Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain	0.79	41.0	5.49e-01	83.1%	90.2%
2hwjA01	3.90.1530.10	Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain	0.63	38.0	4.51e-01	97.2%	85.7%

ECOD (14)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4683061	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.84	45.0	6.32e-01	95.5%	100.0%
3988408	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.77	34.0	5.25e-01	76.8%	100.0%
5010421	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.68	45.0	5.40e-01	83.6%	95.2%
3686504	876.1.1.6 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › PF29418	0.68	40.0	5.18e-01	71.2%	100.0%
3723395	876.1.1.6 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › PF29418	0.63	42.0	5.05e-01	71.8%	100.0%
5057878	876.1.1.1 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc	0.63	44.0	4.97e-01	80.8%	90.6%
4990659	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.62	38.0	4.77e-01	80.8%	95.7%
4995365	876.1.1.1 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc	0.62	42.0	4.98e-01	82.5%	94.6%
5031965	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.62	50.0	5.12e-01	84.7%	96.6%
4934171	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.61	45.0	5.08e-01	84.2%	95.0%
4947338	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.61	49.0	4.81e-01	83.6%	95.3%
5000279	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.55	45.0	4.95e-01	89.3%	100.0%
4996594	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.55	47.0	5.00e-01	90.4%	99.4%
4942529	876.1.1.10 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF1015	0.54	44.0	4.06e-01	84.2%	87.4%

D3 medium residues 270-329

PDB

Domain cluster: representative

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5005687	4033.1.1.1 ↗	alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N	0.54	37.0	3.01e-01	73.3%	84.0%