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NC_055034.1__YP_010082712.1__KMD23_gp04__00004
Bact-VirNC_055034.1__YP_010082712.1__KMD23_gp04__00004
Identity
- Accession:
- NC_055034 ↗
- Kingdom:
- phage
Quality
54.1
mean pLDDT
Taxonomy
TaxID: 2015873
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-61_81-133
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4d7rA01 | 1.10.220.20 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › | 0.59 | 37.0 | 4.23e-01 | 78.9% | 86.6% |
| 3l8nA01 | 1.10.220.20 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › | 0.55 | 34.0 | 3.90e-01 | 78.9% | 90.8% |
| 4oiyA01 | 1.10.220.20 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › | 0.54 | 34.0 | 3.82e-01 | 88.6% | 87.7% |
| 4oj8B00 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.54 | 37.0 | 2.80e-01 | 71.1% | 98.5% |
| 2dyuA01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.51 | 38.0 | 2.92e-01 | 79.8% | 40.5% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3228728 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.78 | 30.0 | 4.75e-01 | 71.9% | 100.0% |
| 3217456 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.77 | 29.0 | 4.70e-01 | 71.9% | 100.0% |
| 3219595 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.76 | 29.0 | 4.69e-01 | 91.2% | 100.0% |
| 3244730 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.73 | 29.0 | 4.36e-01 | 93.0% | 91.1% |
| 3239855 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.73 | 29.0 | 4.36e-01 | 93.0% | 91.1% |
| 3237448 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.73 | 28.0 | 4.44e-01 | 92.1% | 100.0% |
| 3216638 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.72 | 28.0 | 4.41e-01 | 75.4% | 100.0% |
| 3243910 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.71 | 30.0 | 4.35e-01 | 94.7% | 88.0% |
| 3221036 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.71 | 29.0 | 4.33e-01 | 70.2% | 93.3% |
| 3236811 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.71 | 29.0 | 4.25e-01 | 93.0% | 91.1% |
| 3225559 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.71 | 30.0 | 4.49e-01 | 92.1% | 95.6% |
| 3215203 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.71 | 28.0 | 4.21e-01 | 71.9% | 97.5% |
| 3211201 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.70 | 29.0 | 4.30e-01 | 93.9% | 95.6% |
| 3225061 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.70 | 27.0 | 4.26e-01 | 92.1% | 100.0% |
| 3228990 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.69 | 27.0 | 4.20e-01 | 91.2% | 100.0% |
| 3833495 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.68 | 29.0 | 3.29e-01 | 93.0% | 49.4% |
| 3688419 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.68 | 27.0 | 4.10e-01 | 71.9% | 100.0% |
| 3786009 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.68 | 29.0 | 4.32e-01 | 95.6% | 100.0% |
| 3380603 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.68 | 29.0 | 4.32e-01 | 93.9% | 100.0% |
| 4028410 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.65 | 32.0 | 4.39e-01 | 92.1% | 98.2% |
| 4446417 | 145.1.1.31 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › PF29466 | 0.64 | 29.0 | 4.08e-01 | 95.6% | 94.0% |
| 3802856 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.64 | 28.0 | 3.90e-01 | 95.6% | 83.6% |
| 4161288 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.55 | 36.0 | 3.42e-01 | 75.4% | 54.8% |
| 3344585 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.55 | 27.0 | 3.39e-01 | 87.7% | 80.0% |
| 5052468 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.54 | 39.0 | 3.48e-01 | 74.6% | 65.0% |
D2
medium
residues 348-446