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NC_055034.1__YP_010082794.1__KMD23_gp86__00086
Bact-VirNC_055034.1__YP_010082794.1__KMD23_gp86__00086
Identity
- Accession:
- NC_055034 ↗
- Kingdom:
- phage
Quality
91.3
mean pLDDT
Taxonomy
TaxID: 2015873
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-102
Domain cluster:
rep: MW584167.1__QST89423.1__PROPHIGD43A-5_14__00013__D31-103
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qgpA00 | 1.10.30.50 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › | 0.68 | 50.0 | 4.87e-01 | 80.0% | 69.9% |
| 4uy8X00 | 2.30.170.40 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 | 0.58 | 44.0 | 4.43e-01 | 82.7% | 92.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4932123 | 377.7.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › 82 prophage-derived uncharacterized protein ybcO › 82 prophage-derived uncharacterized protein ybcO › HNH | 0.83 | 58.0 | 6.03e-01 | 84.0% | 77.1% |
| 5060915 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.83 | 55.0 | 5.50e-01 | 72.0% | 68.0% |
| 4517886 | 377.1.1.3 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK | 0.80 | 47.0 | 6.00e-01 | 70.7% | 100.0% |
| 3955812 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.68 | 54.0 | 4.99e-01 | 84.0% | 69.9% |
| 5070539 | 3380.1.1.0 ↗ | a+b duplicates or obligate multimers › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 | 0.58 | 37.0 | 4.28e-01 | 70.7% | 89.1% |
| 3611182 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.56 | 35.0 | 3.49e-01 | 76.0% | 58.7% |